fast.genomicscompare 6,575 genera of bacteria & archaea

 

Haladaptatus paucihalophilus DX253

Genome identifier: GCF_000376445.1

NCBI assembly name: ASM37644v1

GTDB taxonomy: Archaea, Halobacteriota, Halobacteria, Halobacteriales, Haladaptataceae, Haladaptatus, Haladaptatus paucihalophilus

NCBI taxonomy: Archaea, Euryarchaeota, Halobacteria, Halobacteriales, Haladaptataceae, Haladaptatus, Haladaptatus paucihalophilus

Scaffolds: 6

Genes: 4,418 Protein-coding: 4,329 RNAs: 58 pseudogenes: 31

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_AQXI01000001.1 Haladaptatus paucihalophilus DX253 B208DRAFT_contig1.1_C, whole genome shotgun sequence 2,950,504
NZ_AQXI01000002.1 Haladaptatus paucihalophilus DX253 B208DRAFT_contig2.2_C, whole genome shotgun sequence 491,863
NZ_AQXI01000003.1 Haladaptatus paucihalophilus DX253 B208DRAFT_contig3.3_C, whole genome shotgun sequence 363,901
NZ_AQXI01000004.1 Haladaptatus paucihalophilus DX253 B208DRAFT_contig4.4_C, whole genome shotgun sequence 316,765
NZ_AQXI01000005.1 Haladaptatus paucihalophilus DX253 B208DRAFT_contig5.5_C, whole genome shotgun sequence 115,374
NZ_AQXI01000006.1 Haladaptatus paucihalophilus DX253 B208DRAFT_contig6.6_C, whole genome shotgun sequence 79,133

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory