fast.genomicscompare 6,575 genera of bacteria & archaea

 

Gilvimarinus chinensis DSM 19667

Genome identifier: GCF_000377745.1

NCBI assembly name: ASM37774v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Pseudomonadales, Cellvibrionaceae, Gilvimarinus, Gilvimarinus chinensis

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Cellvibrionales, Cellvibrionaceae, Gilvimarinus, Gilvimarinus chinensis

Scaffolds: 18

Genes: 3,630 Protein-coding: 3,541 RNAs: 67 pseudogenes: 22

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_KB898706.1 Gilvimarinus chinensis DSM 19667 D568DRAFT_scaffold00001.1, whole genome shotgun sequence 1,292,935
NZ_KB898707.1 Gilvimarinus chinensis DSM 19667 D568DRAFT_scaffold00002.2, whole genome shotgun sequence 774,481
NZ_KB898708.1 Gilvimarinus chinensis DSM 19667 D568DRAFT_scaffold00003.3, whole genome shotgun sequence 452,813
NZ_KB898709.1 Gilvimarinus chinensis DSM 19667 D568DRAFT_scaffold00004.4, whole genome shotgun sequence 414,604
NZ_KB898710.1 Gilvimarinus chinensis DSM 19667 D568DRAFT_scaffold00005.5, whole genome shotgun sequence 267,227
NZ_KB898711.1 Gilvimarinus chinensis DSM 19667 D568DRAFT_scaffold00006.6, whole genome shotgun sequence 254,397
NZ_KB898712.1 Gilvimarinus chinensis DSM 19667 D568DRAFT_scaffold00007.7, whole genome shotgun sequence 141,084
NZ_KB898713.1 Gilvimarinus chinensis DSM 19667 D568DRAFT_scaffold00008.8, whole genome shotgun sequence 140,437
NZ_KB898714.1 Gilvimarinus chinensis DSM 19667 D568DRAFT_scaffold00009.9, whole genome shotgun sequence 112,035
NZ_KB898715.1 Gilvimarinus chinensis DSM 19667 D568DRAFT_scaffold00010.10, whole genome shotgun sequence 73,427
NZ_KB898716.1 Gilvimarinus chinensis DSM 19667 D568DRAFT_scaffold00011.11, whole genome shotgun sequence 32,944
NZ_KB898717.1 Gilvimarinus chinensis DSM 19667 D568DRAFT_scaffold00012.12, whole genome shotgun sequence 30,843
NZ_KB898718.1 Gilvimarinus chinensis DSM 19667 D568DRAFT_scaffold00013.13, whole genome shotgun sequence 28,532
NZ_KB898719.1 Gilvimarinus chinensis DSM 19667 D568DRAFT_scaffold00014.14, whole genome shotgun sequence 16,446
NZ_KB898720.1 Gilvimarinus chinensis DSM 19667 D568DRAFT_scaffold00015.15, whole genome shotgun sequence 12,903
NZ_KB898721.1 Gilvimarinus chinensis DSM 19667 D568DRAFT_scaffold00016.16, whole genome shotgun sequence 12,834
NZ_KB898722.1 Gilvimarinus chinensis DSM 19667 D568DRAFT_scaffold00017.17, whole genome shotgun sequence 9,048
NZ_KB898723.1 Gilvimarinus chinensis DSM 19667 D568DRAFT_scaffold00018.18, whole genome shotgun sequence 1,876

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory