fast.genomicscompare 6,575 genera of bacteria & archaea

 

Rudaea cellulosilytica DSM 22992

Genome identifier: GCF_000378125.1

NCBI assembly name: ASM37812v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Xanthomonadales, Rhodanobacteraceae, Rudaea, Rudaea cellulosilytica

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Xanthomonadales, Rhodanobacteraceae, Rudaea, Rudaea cellulosilytica

Scaffolds: 6

Genes: 3,769 Protein-coding: 3,695 RNAs: 54 pseudogenes: 20

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_KB899241.1 Rudaea cellulosilytica DSM 22992 F455DRAFT_scaffold00001.1, whole genome shotgun sequence 2,253,357
NZ_KB899242.1 Rudaea cellulosilytica DSM 22992 F455DRAFT_scaffold00002.2, whole genome shotgun sequence 1,056,321
NZ_KB899243.1 Rudaea cellulosilytica DSM 22992 F455DRAFT_scaffold00003.3, whole genome shotgun sequence 460,896
NZ_KB899244.1 Rudaea cellulosilytica DSM 22992 F455DRAFT_scaffold00004.4, whole genome shotgun sequence 350,866
NZ_KB899245.1 Rudaea cellulosilytica DSM 22992 F455DRAFT_scaffold00005.5, whole genome shotgun sequence 220,937
NZ_KB899246.1 Rudaea cellulosilytica DSM 22992 F455DRAFT_scaffold00006.6, whole genome shotgun sequence 1,262

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory