fast.genomicscompare 6,575 genera of bacteria & archaea

 

Sediminispirochaeta bajacaliforniensis DSM 16054

Genome identifier: GCF_000378205.1

NCBI assembly name: ASM37820v1

GTDB taxonomy: Bacteria, Spirochaetota, Spirochaetia, DSM-16054, Sediminispirochaetaceae, Sediminispirochaeta, Sediminispirochaeta bajacaliforniensis

NCBI taxonomy: Bacteria, Spirochaetota, Spirochaetia, Spirochaetales, Spirochaetaceae, Sediminispirochaeta, Sediminispirochaeta bajacaliforniensis

Scaffolds: 75

Genes: 4,283 Protein-coding: 4,199 RNAs: 54 pseudogenes: 30

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_KB899406.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00001.1, whole genome shotgun sequence 375,186
NZ_KB899407.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00002.2, whole genome shotgun sequence 303,294
NZ_KB899408.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00003.3, whole genome shotgun sequence 249,796
NZ_KB899409.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00004.4, whole genome shotgun sequence 247,948
NZ_KB899410.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00005.5, whole genome shotgun sequence 230,157
NZ_KB899411.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00006.6, whole genome shotgun sequence 228,215
NZ_KB899412.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00007.7, whole genome shotgun sequence 190,244
NZ_KB899413.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00008.8, whole genome shotgun sequence 186,186
NZ_KB899414.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00009.9, whole genome shotgun sequence 180,292
NZ_KB899415.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00010.10, whole genome shotgun sequence 176,769
NZ_KB899416.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00011.11, whole genome shotgun sequence 169,491
NZ_KB899417.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00012.12, whole genome shotgun sequence 166,221
NZ_KB899418.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00013.13, whole genome shotgun sequence 165,110
NZ_KB899419.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00014.14, whole genome shotgun sequence 158,909
NZ_KB899420.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00015.15, whole genome shotgun sequence 132,353
NZ_KB899421.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00016.16, whole genome shotgun sequence 116,919
NZ_KB899422.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00017.17, whole genome shotgun sequence 116,470
NZ_KB899423.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00018.18, whole genome shotgun sequence 100,038
NZ_KB899424.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00019.19, whole genome shotgun sequence 84,695
NZ_KB899425.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00020.20, whole genome shotgun sequence 80,864
NZ_KB899426.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00021.21, whole genome shotgun sequence 77,384
NZ_KB899427.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00022.22, whole genome shotgun sequence 72,447
NZ_KB899428.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00023.23, whole genome shotgun sequence 68,871
NZ_KB899429.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00024.24, whole genome shotgun sequence 62,372
NZ_KB899430.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00025.25, whole genome shotgun sequence 54,924
NZ_KB899431.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00026.26, whole genome shotgun sequence 54,251
NZ_KB899432.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00027.27, whole genome shotgun sequence 46,229
NZ_KB899433.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00028.28, whole genome shotgun sequence 44,263
NZ_KB899434.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00029.29, whole genome shotgun sequence 42,671
NZ_KB899435.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00030.30, whole genome shotgun sequence 35,650
NZ_KB899436.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00031.31, whole genome shotgun sequence 33,381
NZ_KB899437.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00032.32, whole genome shotgun sequence 30,395
NZ_KB899438.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00033.33, whole genome shotgun sequence 24,097
NZ_KB899439.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00034.34, whole genome shotgun sequence 23,945
NZ_KB899440.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00035.35, whole genome shotgun sequence 22,403
NZ_KB899441.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00036.36, whole genome shotgun sequence 22,006
NZ_KB899442.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00037.37, whole genome shotgun sequence 19,357
NZ_KB899443.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00038.38, whole genome shotgun sequence 15,129
NZ_KB899444.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00039.39, whole genome shotgun sequence 14,646
NZ_KB899445.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00040.40, whole genome shotgun sequence 11,085
NZ_KB899446.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00041.41, whole genome shotgun sequence 11,032
NZ_KB899447.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00042.42, whole genome shotgun sequence 10,584
NZ_KB899448.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00043.43, whole genome shotgun sequence 9,394
NZ_KB899449.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00044.44, whole genome shotgun sequence 8,112
NZ_KB899450.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00045.45, whole genome shotgun sequence 7,976
NZ_KB899451.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00046.46, whole genome shotgun sequence 7,893
NZ_KB899452.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00047.47, whole genome shotgun sequence 7,244
NZ_KB899453.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00048.48, whole genome shotgun sequence 7,126
NZ_KB899454.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00049.49, whole genome shotgun sequence 5,730
NZ_KB899455.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00050.50, whole genome shotgun sequence 5,225
NZ_KB899456.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00051.51, whole genome shotgun sequence 5,216
NZ_KB899457.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00052.52, whole genome shotgun sequence 4,685
NZ_KB899458.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00053.53, whole genome shotgun sequence 3,975
NZ_KB899459.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00054.54, whole genome shotgun sequence 3,746
NZ_KB899460.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00055.55, whole genome shotgun sequence 3,230
NZ_KB899461.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00056.56, whole genome shotgun sequence 3,203
NZ_KB899462.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00057.57, whole genome shotgun sequence 3,120
NZ_KB899463.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00058.58, whole genome shotgun sequence 3,020
NZ_KB899464.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00059.59, whole genome shotgun sequence 2,988
NZ_KB899465.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00060.60, whole genome shotgun sequence 2,765
NZ_KB899466.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00061.61, whole genome shotgun sequence 2,754
NZ_KB899467.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00062.62, whole genome shotgun sequence 2,594
NZ_KB899468.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00063.63, whole genome shotgun sequence 2,370
NZ_KB899469.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00064.64, whole genome shotgun sequence 2,342
NZ_KB899470.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00065.65, whole genome shotgun sequence 1,982
NZ_KB899471.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00066.66, whole genome shotgun sequence 1,580
NZ_KB899472.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00067.67, whole genome shotgun sequence 1,567
NZ_KB899473.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00068.68, whole genome shotgun sequence 1,564
NZ_KB899474.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00069.69, whole genome shotgun sequence 1,382
NZ_KB899475.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00070.70, whole genome shotgun sequence 1,382
NZ_KB899476.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00071.71, whole genome shotgun sequence 1,378
NZ_KB899477.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00072.72, whole genome shotgun sequence 1,285
NZ_KB899478.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00073.73, whole genome shotgun sequence 1,279
NZ_KB899479.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00074.74, whole genome shotgun sequence 1,125
NZ_KB899480.1 Sediminispirochaeta bajacaliforniensis DSM 16054 F459DRAFT_scaffold00075.75, whole genome shotgun sequence 1,096

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory