fast.genomicscompare 6,575 genera of bacteria & archaea

 

Orenia marismortui DSM 5156

Genome identifier: GCF_000379025.1

NCBI assembly name: ASM37902v1

GTDB taxonomy: Bacteria, Bacillota_F, Halanaerobiia, Halobacteroidales, Halobacteroidaceae, Orenia, Orenia marismortui

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Halanaerobiales, Halobacteroidaceae, Orenia, Orenia marismortui

Scaffolds: 9

Genes: 3,287 Protein-coding: 3,168 RNAs: 100 pseudogenes: 19

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_KB900617.1 Orenia marismortui DSM 5156 OREMADRAFT_scaffold1.1, whole genome shotgun sequence 1,317,364
NZ_KB900618.1 Orenia marismortui DSM 5156 OREMADRAFT_scaffold2.2, whole genome shotgun sequence 480,926
NZ_KB900619.1 Orenia marismortui DSM 5156 OREMADRAFT_scaffold3.3, whole genome shotgun sequence 249,370
NZ_KB900620.1 Orenia marismortui DSM 5156 OREMADRAFT_scaffold4.4, whole genome shotgun sequence 396,395
NZ_KB900621.1 Orenia marismortui DSM 5156 OREMADRAFT_scaffold5.5, whole genome shotgun sequence 163,135
NZ_KB900622.1 Orenia marismortui DSM 5156 OREMADRAFT_scaffold6.6, whole genome shotgun sequence 240,800
NZ_KB900623.1 Orenia marismortui DSM 5156 OREMADRAFT_scaffold7.7, whole genome shotgun sequence 500,396
NZ_KB900624.1 Orenia marismortui DSM 5156 OREMADRAFT_scaffold8.8, whole genome shotgun sequence 107,775
NZ_KB900625.1 Orenia marismortui DSM 5156 OREMADRAFT_scaffold9.9, whole genome shotgun sequence 3,605

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory