fast.genomicscompare 6,575 genera of bacteria & archaea

 

Wenxinia marina DSM 24838

Genome identifier: GCF_000379485.1

NCBI assembly name: ASM37948v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Wenxinia, Wenxinia marina

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Roseobacteraceae, Wenxinia, Wenxinia marina

Scaffolds: 41

Genes: 4,105 Protein-coding: 3,986 RNAs: 53 pseudogenes: 66

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_KB902276.1 Wenxinia marina DSM 24838 A37WDRAFT_scaffold_0.1, whole genome shotgun sequence 386,680
NZ_KB902277.1 Wenxinia marina DSM 24838 A37WDRAFT_scaffold_1.2, whole genome shotgun sequence 314,870
NZ_KB902278.1 Wenxinia marina DSM 24838 A37WDRAFT_scaffold_10.11, whole genome shotgun sequence 140,224
NZ_KB902279.1 Wenxinia marina DSM 24838 A37WDRAFT_scaffold_11.12, whole genome shotgun sequence 137,670
NZ_KB902280.1 Wenxinia marina DSM 24838 A37WDRAFT_scaffold_12.13, whole genome shotgun sequence 125,182
NZ_KB902281.1 Wenxinia marina DSM 24838 A37WDRAFT_scaffold_13.14, whole genome shotgun sequence 125,069
NZ_KB902282.1 Wenxinia marina DSM 24838 A37WDRAFT_scaffold_14.15, whole genome shotgun sequence 124,152
NZ_KB902283.1 Wenxinia marina DSM 24838 A37WDRAFT_scaffold_15.16, whole genome shotgun sequence 119,638
NZ_KB902284.1 Wenxinia marina DSM 24838 A37WDRAFT_scaffold_16.17, whole genome shotgun sequence 102,315
NZ_KB902285.1 Wenxinia marina DSM 24838 A37WDRAFT_scaffold_17.18, whole genome shotgun sequence 98,792
NZ_KB902286.1 Wenxinia marina DSM 24838 A37WDRAFT_scaffold_18.19, whole genome shotgun sequence 98,407
NZ_KB902287.1 Wenxinia marina DSM 24838 A37WDRAFT_scaffold_19.20, whole genome shotgun sequence 77,703
NZ_KB902288.1 Wenxinia marina DSM 24838 A37WDRAFT_scaffold_2.3, whole genome shotgun sequence 289,214
NZ_KB902289.1 Wenxinia marina DSM 24838 A37WDRAFT_scaffold_20.21, whole genome shotgun sequence 69,789
NZ_KB902290.1 Wenxinia marina DSM 24838 A37WDRAFT_scaffold_21.22, whole genome shotgun sequence 67,467
NZ_KB902291.1 Wenxinia marina DSM 24838 A37WDRAFT_scaffold_22.23, whole genome shotgun sequence 67,152
NZ_KB902292.1 Wenxinia marina DSM 24838 A37WDRAFT_scaffold_23.24, whole genome shotgun sequence 53,704
NZ_KB902293.1 Wenxinia marina DSM 24838 A37WDRAFT_scaffold_24.25, whole genome shotgun sequence 53,040
NZ_KB902294.1 Wenxinia marina DSM 24838 A37WDRAFT_scaffold_25.26, whole genome shotgun sequence 52,751
NZ_KB902295.1 Wenxinia marina DSM 24838 A37WDRAFT_scaffold_26.27, whole genome shotgun sequence 41,479
NZ_KB902296.1 Wenxinia marina DSM 24838 A37WDRAFT_scaffold_27.28, whole genome shotgun sequence 35,534
NZ_KB902297.1 Wenxinia marina DSM 24838 A37WDRAFT_scaffold_28.29, whole genome shotgun sequence 34,605
NZ_KB902298.1 Wenxinia marina DSM 24838 A37WDRAFT_scaffold_29.30, whole genome shotgun sequence 33,806
NZ_KB902299.1 Wenxinia marina DSM 24838 A37WDRAFT_scaffold_3.4, whole genome shotgun sequence 259,519
NZ_KB902300.1 Wenxinia marina DSM 24838 A37WDRAFT_scaffold_30.31, whole genome shotgun sequence 29,053
NZ_KB902301.1 Wenxinia marina DSM 24838 A37WDRAFT_scaffold_31.32, whole genome shotgun sequence 13,769
NZ_KB902302.1 Wenxinia marina DSM 24838 A37WDRAFT_scaffold_32.33, whole genome shotgun sequence 11,343
NZ_KB902303.1 Wenxinia marina DSM 24838 A37WDRAFT_scaffold_33.34, whole genome shotgun sequence 7,911
NZ_KB902304.1 Wenxinia marina DSM 24838 A37WDRAFT_scaffold_34.35, whole genome shotgun sequence 7,288
NZ_KB902305.1 Wenxinia marina DSM 24838 A37WDRAFT_scaffold_35.36, whole genome shotgun sequence 6,753
NZ_KB902306.1 Wenxinia marina DSM 24838 A37WDRAFT_scaffold_36.37, whole genome shotgun sequence 2,857
NZ_KB902307.1 Wenxinia marina DSM 24838 A37WDRAFT_scaffold_37.38, whole genome shotgun sequence 1,308
NZ_KB902308.1 Wenxinia marina DSM 24838 A37WDRAFT_scaffold_38.39, whole genome shotgun sequence 1,308
NZ_KB902309.1 Wenxinia marina DSM 24838 A37WDRAFT_scaffold_39.40, whole genome shotgun sequence 1,307
NZ_KB902310.1 Wenxinia marina DSM 24838 A37WDRAFT_scaffold_4.5, whole genome shotgun sequence 250,199
NZ_KB902311.1 Wenxinia marina DSM 24838 A37WDRAFT_scaffold_40.41, whole genome shotgun sequence 1,211
NZ_KB902312.1 Wenxinia marina DSM 24838 A37WDRAFT_scaffold_5.6, whole genome shotgun sequence 244,961
NZ_KB902313.1 Wenxinia marina DSM 24838 A37WDRAFT_scaffold_6.7, whole genome shotgun sequence 204,158
NZ_KB902314.1 Wenxinia marina DSM 24838 A37WDRAFT_scaffold_7.8, whole genome shotgun sequence 193,930
NZ_KB902315.1 Wenxinia marina DSM 24838 A37WDRAFT_scaffold_8.9, whole genome shotgun sequence 145,529
NZ_KB902316.1 Wenxinia marina DSM 24838 A37WDRAFT_scaffold_9.10, whole genome shotgun sequence 144,245

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory