fast.genomicscompare 6,575 genera of bacteria & archaea

 

Yoonia vestfoldensis DSM 16212

Genome identifier: GCF_000382265.1

NCBI assembly name: ASM38226v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Yoonia, Yoonia vestfoldensis

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Yoonia, Yoonia vestfoldensis

Scaffolds: 45

Genes: 3,792 Protein-coding: 3,700 RNAs: 60 pseudogenes: 32

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_KB907973.1 Yoonia vestfoldensis DSM 16212 H147DRAFT_scaffold00001.1, whole genome shotgun sequence 319,470
NZ_KB907974.1 Yoonia vestfoldensis DSM 16212 H147DRAFT_scaffold00002.2, whole genome shotgun sequence 284,781
NZ_KB907975.1 Yoonia vestfoldensis DSM 16212 H147DRAFT_scaffold00003.3, whole genome shotgun sequence 269,540
NZ_KB907976.1 Yoonia vestfoldensis DSM 16212 H147DRAFT_scaffold00004.4, whole genome shotgun sequence 251,098
NZ_KB907977.1 Yoonia vestfoldensis DSM 16212 H147DRAFT_scaffold00005.5, whole genome shotgun sequence 223,188
NZ_KB907978.1 Yoonia vestfoldensis DSM 16212 H147DRAFT_scaffold00006.6, whole genome shotgun sequence 221,895
NZ_KB907979.1 Yoonia vestfoldensis DSM 16212 H147DRAFT_scaffold00007.7, whole genome shotgun sequence 208,102
NZ_KB907980.1 Yoonia vestfoldensis DSM 16212 H147DRAFT_scaffold00008.8, whole genome shotgun sequence 202,901
NZ_KB907981.1 Yoonia vestfoldensis DSM 16212 H147DRAFT_scaffold00009.9, whole genome shotgun sequence 175,305
NZ_KB907982.1 Yoonia vestfoldensis DSM 16212 H147DRAFT_scaffold00010.10, whole genome shotgun sequence 163,820
NZ_KB907983.1 Yoonia vestfoldensis DSM 16212 H147DRAFT_scaffold00011.11, whole genome shotgun sequence 145,084
NZ_KB907984.1 Yoonia vestfoldensis DSM 16212 H147DRAFT_scaffold00012.12, whole genome shotgun sequence 139,411
NZ_KB907985.1 Yoonia vestfoldensis DSM 16212 H147DRAFT_scaffold00013.13, whole genome shotgun sequence 114,447
NZ_KB907986.1 Yoonia vestfoldensis DSM 16212 H147DRAFT_scaffold00014.14, whole genome shotgun sequence 105,786
NZ_KB907987.1 Yoonia vestfoldensis DSM 16212 H147DRAFT_scaffold00015.15, whole genome shotgun sequence 98,320
NZ_KB907988.1 Yoonia vestfoldensis DSM 16212 H147DRAFT_scaffold00016.16, whole genome shotgun sequence 85,987
NZ_KB907989.1 Yoonia vestfoldensis DSM 16212 H147DRAFT_scaffold00017.17, whole genome shotgun sequence 74,527
NZ_KB907990.1 Yoonia vestfoldensis DSM 16212 H147DRAFT_scaffold00018.18, whole genome shotgun sequence 73,793
NZ_KB907991.1 Yoonia vestfoldensis DSM 16212 H147DRAFT_scaffold00019.19, whole genome shotgun sequence 73,029
NZ_KB907992.1 Yoonia vestfoldensis DSM 16212 H147DRAFT_scaffold00020.20, whole genome shotgun sequence 65,106
NZ_KB907993.1 Yoonia vestfoldensis DSM 16212 H147DRAFT_scaffold00021.21, whole genome shotgun sequence 53,139
NZ_KB907994.1 Yoonia vestfoldensis DSM 16212 H147DRAFT_scaffold00022.22, whole genome shotgun sequence 44,937
NZ_KB907995.1 Yoonia vestfoldensis DSM 16212 H147DRAFT_scaffold00023.23, whole genome shotgun sequence 32,015
NZ_KB907996.1 Yoonia vestfoldensis DSM 16212 H147DRAFT_scaffold00024.24, whole genome shotgun sequence 31,844
NZ_KB907997.1 Yoonia vestfoldensis DSM 16212 H147DRAFT_scaffold00025.25, whole genome shotgun sequence 25,148
NZ_KB907998.1 Yoonia vestfoldensis DSM 16212 H147DRAFT_scaffold00026.26, whole genome shotgun sequence 24,912
NZ_KB907999.1 Yoonia vestfoldensis DSM 16212 H147DRAFT_scaffold00027.27, whole genome shotgun sequence 24,170
NZ_KB908000.1 Yoonia vestfoldensis DSM 16212 H147DRAFT_scaffold00028.28, whole genome shotgun sequence 22,909
NZ_KB908001.1 Yoonia vestfoldensis DSM 16212 H147DRAFT_scaffold00029.29, whole genome shotgun sequence 20,659
NZ_KB908002.1 Yoonia vestfoldensis DSM 16212 H147DRAFT_scaffold00030.30, whole genome shotgun sequence 18,494
NZ_KB908003.1 Yoonia vestfoldensis DSM 16212 H147DRAFT_scaffold00031.31, whole genome shotgun sequence 18,061
NZ_KB908004.1 Yoonia vestfoldensis DSM 16212 H147DRAFT_scaffold00032.32, whole genome shotgun sequence 17,592
NZ_KB908005.1 Yoonia vestfoldensis DSM 16212 H147DRAFT_scaffold00033.33, whole genome shotgun sequence 16,588
NZ_KB908006.1 Yoonia vestfoldensis DSM 16212 H147DRAFT_scaffold00034.34, whole genome shotgun sequence 14,716
NZ_KB908007.1 Yoonia vestfoldensis DSM 16212 H147DRAFT_scaffold00035.35, whole genome shotgun sequence 14,370
NZ_KB908008.1 Yoonia vestfoldensis DSM 16212 H147DRAFT_scaffold00036.36, whole genome shotgun sequence 11,029
NZ_KB908009.1 Yoonia vestfoldensis DSM 16212 H147DRAFT_scaffold00037.37, whole genome shotgun sequence 8,386
NZ_KB908010.1 Yoonia vestfoldensis DSM 16212 H147DRAFT_scaffold00038.38, whole genome shotgun sequence 7,675
NZ_KB908011.1 Yoonia vestfoldensis DSM 16212 H147DRAFT_scaffold00039.39, whole genome shotgun sequence 5,092
NZ_KB908012.1 Yoonia vestfoldensis DSM 16212 H147DRAFT_scaffold00040.40, whole genome shotgun sequence 4,976
NZ_KB908013.1 Yoonia vestfoldensis DSM 16212 H147DRAFT_scaffold00041.41, whole genome shotgun sequence 3,513
NZ_KB908014.1 Yoonia vestfoldensis DSM 16212 H147DRAFT_scaffold00042.42, whole genome shotgun sequence 1,777
NZ_KB908015.1 Yoonia vestfoldensis DSM 16212 H147DRAFT_scaffold00043.43, whole genome shotgun sequence 1,587
NZ_KB908016.1 Yoonia vestfoldensis DSM 16212 H147DRAFT_scaffold00044.44, whole genome shotgun sequence 1,295
NZ_KB908017.1 Yoonia vestfoldensis DSM 16212 H147DRAFT_scaffold00045.45, whole genome shotgun sequence 1,122

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory