fast.genomicscompare 6,575 genera of bacteria & archaea

 

Geopsychrobacter electrodiphilus DSM 16401

Genome identifier: GCF_000384395.1

NCBI assembly name: ASM38439v1

GTDB taxonomy: Bacteria, Desulfobacterota, Desulfuromonadia, Desulfuromonadales, Geopsychrobacteraceae, Geopsychrobacter, Geopsychrobacter electrodiphilus

NCBI taxonomy: Bacteria, Thermodesulfobacteriota, Desulfuromonadia, Desulfuromonadales, Geopsychrobacteraceae, Geopsychrobacter, Geopsychrobacter electrodiphilus

Scaffolds: 1

Genes: 3,890 Protein-coding: 3,809 RNAs: 55 pseudogenes: 26

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_ARWE01000001.1 Geopsychrobacter electrodiphilus DSM 16401 D888DRAFT_scaffold00001.1_C, whole genome shotgun sequence 4,241,730

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory