fast.genomicscompare 6,575 genera of bacteria & archaea

 

Petralouisia sp000403845 14-2

Genome identifier: GCF_000403845.2

NCBI assembly name: Euba_bact_14-2_V1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Lachnospirales, Lachnospiraceae, Petralouisia, Petralouisia sp000403845

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Eubacteriaceae, Eubacterium

Scaffolds: 4

Genes: 3,863 Protein-coding: 3,710 RNAs: 67 pseudogenes: 86

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_KE159567.1 Eubacterium sp. 14-2 acPFD-supercont1.1, whole genome shotgun sequence 2,223,396
NZ_KE159568.1 Eubacterium sp. 14-2 acPFD-supercont1.2, whole genome shotgun sequence 1,542,508
NZ_KE159569.1 Eubacterium sp. 14-2 acPFD-supercont1.3, whole genome shotgun sequence 226,613
NZ_KE159570.1 Eubacterium sp. 14-2 acPFD-supercont1.4, whole genome shotgun sequence 4,351

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory