fast.genomicscompare 6,575 genera of bacteria & archaea

 

Fodinicurvata sediminis DSM 21159

Genome identifier: GCF_000420625.1

NCBI assembly name: ASM42062v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Kiloniellales, DSM-21159, Fodinicurvata, Fodinicurvata sediminis

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Rhodovibrionaceae, Fodinicurvata, Fodinicurvata sediminis

Scaffolds: 20

Genes: 3,515 Protein-coding: 3,438 RNAs: 57 pseudogenes: 20

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_ATVH01000001.1 Fodinicurvata sediminis DSM 21159 G502DRAFT_scaffold00010.10_C, whole genome shotgun sequence 66,772
NZ_ATVH01000002.1 Fodinicurvata sediminis DSM 21159 G502DRAFT_scaffold00011.11_C, whole genome shotgun sequence 57,423
NZ_ATVH01000003.1 Fodinicurvata sediminis DSM 21159 G502DRAFT_scaffold00012.12_C, whole genome shotgun sequence 30,288
NZ_ATVH01000004.1 Fodinicurvata sediminis DSM 21159 G502DRAFT_scaffold00013.13_C, whole genome shotgun sequence 25,613
NZ_ATVH01000005.1 Fodinicurvata sediminis DSM 21159 G502DRAFT_scaffold00014.14_C, whole genome shotgun sequence 24,850
NZ_ATVH01000006.1 Fodinicurvata sediminis DSM 21159 G502DRAFT_scaffold00015.15_C, whole genome shotgun sequence 16,828
NZ_ATVH01000007.1 Fodinicurvata sediminis DSM 21159 G502DRAFT_scaffold00016.16_C, whole genome shotgun sequence 14,533
NZ_ATVH01000008.1 Fodinicurvata sediminis DSM 21159 G502DRAFT_scaffold00017.17_C, whole genome shotgun sequence 9,206
NZ_ATVH01000009.1 Fodinicurvata sediminis DSM 21159 G502DRAFT_scaffold00018.18_C, whole genome shotgun sequence 2,967
NZ_ATVH01000010.1 Fodinicurvata sediminis DSM 21159 G502DRAFT_scaffold00019.19_C, whole genome shotgun sequence 2,088
NZ_ATVH01000011.1 Fodinicurvata sediminis DSM 21159 G502DRAFT_scaffold00001.1_C, whole genome shotgun sequence 755,816
NZ_ATVH01000012.1 Fodinicurvata sediminis DSM 21159 G502DRAFT_scaffold00020.20_C, whole genome shotgun sequence 1,103
NZ_ATVH01000013.1 Fodinicurvata sediminis DSM 21159 G502DRAFT_scaffold00002.2_C, whole genome shotgun sequence 588,974
NZ_ATVH01000014.1 Fodinicurvata sediminis DSM 21159 G502DRAFT_scaffold00003.3_C, whole genome shotgun sequence 551,509
NZ_ATVH01000015.1 Fodinicurvata sediminis DSM 21159 G502DRAFT_scaffold00004.4_C, whole genome shotgun sequence 470,181
NZ_ATVH01000016.1 Fodinicurvata sediminis DSM 21159 G502DRAFT_scaffold00005.5_C, whole genome shotgun sequence 267,709
NZ_ATVH01000017.1 Fodinicurvata sediminis DSM 21159 G502DRAFT_scaffold00006.6_C, whole genome shotgun sequence 251,596
NZ_ATVH01000018.1 Fodinicurvata sediminis DSM 21159 G502DRAFT_scaffold00007.7_C, whole genome shotgun sequence 207,269
NZ_ATVH01000019.1 Fodinicurvata sediminis DSM 21159 G502DRAFT_scaffold00008.8_C, whole genome shotgun sequence 175,247
NZ_ATVH01000020.1 Fodinicurvata sediminis DSM 21159 G502DRAFT_scaffold00009.9_C, whole genome shotgun sequence 170,576

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory