fast.genomicscompare 6,575 genera of bacteria & archaea

 

Methylohalobius crimeensis 10Ki

Genome identifier: GCF_000421465.1

NCBI assembly name: ASM42146v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Methylococcales, Methylothermaceae, Methylohalobius, Methylohalobius crimeensis

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Methylococcales, Methylothermaceae, Methylohalobius, Methylohalobius crimeensis

Scaffolds: 5

Genes: 3,414 Protein-coding: 3,328 RNAs: 56 pseudogenes: 30

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_ATXB01000001.1 Methylohalobius crimeensis 10Ki H035DRAFT_scaffold00001.1_C, whole genome shotgun sequence 2,752,995
NZ_ATXB01000002.1 Methylohalobius crimeensis 10Ki H035DRAFT_scaffold00002.2_C, whole genome shotgun sequence 737,379
NZ_ATXB01000003.1 Methylohalobius crimeensis 10Ki H035DRAFT_scaffold00003.3_C, whole genome shotgun sequence 6,837
NZ_ATXB01000004.1 Methylohalobius crimeensis 10Ki H035DRAFT_scaffold00004.4_C, whole genome shotgun sequence 6,198
NZ_ATXB01000005.1 Methylohalobius crimeensis 10Ki H035DRAFT_scaffold00005.5_C, whole genome shotgun sequence 6,198

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory