fast.genomicscompare 6,575 genera of bacteria & archaea

 

Luteimonas mephitis DSM 12574

Genome identifier: GCF_000422305.1

NCBI assembly name: ASM42230v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Xanthomonadales, Xanthomonadaceae, Luteimonas, Luteimonas mephitis

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Xanthomonadales, Xanthomonadaceae, Luteimonas, Luteimonas mephitis

Scaffolds: 18

Genes: 3,112 Protein-coding: 3,012 RNAs: 52 pseudogenes: 48

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_AULN01000001.1 Luteimonas mephitis DSM 12574 H570DRAFT_scaffold00010.10_C, whole genome shotgun sequence 17,899
NZ_AULN01000002.1 Luteimonas mephitis DSM 12574 H570DRAFT_scaffold00011.11_C, whole genome shotgun sequence 3,292
NZ_AULN01000003.1 Luteimonas mephitis DSM 12574 H570DRAFT_scaffold00012.12_C, whole genome shotgun sequence 2,967
NZ_AULN01000004.1 Luteimonas mephitis DSM 12574 H570DRAFT_scaffold00013.13_C, whole genome shotgun sequence 2,511
NZ_AULN01000005.1 Luteimonas mephitis DSM 12574 H570DRAFT_scaffold00014.14_C, whole genome shotgun sequence 2,240
NZ_AULN01000006.1 Luteimonas mephitis DSM 12574 H570DRAFT_scaffold00015.15_C, whole genome shotgun sequence 1,237
NZ_AULN01000007.1 Luteimonas mephitis DSM 12574 H570DRAFT_scaffold00016.16_C, whole genome shotgun sequence 1,208
NZ_AULN01000008.1 Luteimonas mephitis DSM 12574 H570DRAFT_scaffold00017.17_C, whole genome shotgun sequence 1,185
NZ_AULN01000009.1 Luteimonas mephitis DSM 12574 H570DRAFT_scaffold00018.18_C, whole genome shotgun sequence 1,115
NZ_AULN01000012.1 Luteimonas mephitis DSM 12574 H570DRAFT_scaffold00002.2_C, whole genome shotgun sequence 526,227
NZ_AULN01000013.1 Luteimonas mephitis DSM 12574 H570DRAFT_scaffold00003.3_C, whole genome shotgun sequence 510,129
NZ_AULN01000014.1 Luteimonas mephitis DSM 12574 H570DRAFT_scaffold00004.4_C, whole genome shotgun sequence 471,857
NZ_AULN01000017.1 Luteimonas mephitis DSM 12574 H570DRAFT_scaffold00006.6_C, whole genome shotgun sequence 223,560
NZ_AULN01000018.1 Luteimonas mephitis DSM 12574 H570DRAFT_scaffold00007.7_C, whole genome shotgun sequence 216,609
NZ_AULN01000019.1 Luteimonas mephitis DSM 12574 H570DRAFT_scaffold00008.8_C, whole genome shotgun sequence 167,283
NZ_AULN01000020.1 Luteimonas mephitis DSM 12574 H570DRAFT_scaffold00009.9_C, whole genome shotgun sequence 51,480
NZ_KE383816.1 Luteimonas mephitis DSM 12574 H570DRAFT_scaffold00001.1, whole genome shotgun sequence 812,784
NZ_KE383817.1 Luteimonas mephitis DSM 12574 H570DRAFT_scaffold00005.5, whole genome shotgun sequence 402,428

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory