fast.genomicscompare 6,575 genera of bacteria & archaea

 

Mesoflavibacter zeaxanthinifaciens DSM 18436

Genome identifier: GCF_000422365.1

NCBI assembly name: ASM42236v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Flavobacteriales, Flavobacteriaceae, Mesoflavibacter, Mesoflavibacter zeaxanthinifaciens

NCBI taxonomy: Bacteria, Bacteroidota, Flavobacteriia, Flavobacteriales, Flavobacteriaceae, Mesoflavibacter, Mesoflavibacter zeaxanthinifaciens

Scaffolds: 21

Genes: 2,734 Protein-coding: 2,677 RNAs: 48 pseudogenes: 9

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_AULQ01000001.1 Mesoflavibacter zeaxanthinifaciens DSM 18436 H574DRAFT_scaffold00001.1_C, whole genome shotgun sequence 603,844
NZ_AULQ01000002.1 Mesoflavibacter zeaxanthinifaciens DSM 18436 H574DRAFT_scaffold00002.2_C, whole genome shotgun sequence 380,107
NZ_AULQ01000005.1 Mesoflavibacter zeaxanthinifaciens DSM 18436 H574DRAFT_scaffold00004.4_C, whole genome shotgun sequence 338,188
NZ_AULQ01000006.1 Mesoflavibacter zeaxanthinifaciens DSM 18436 H574DRAFT_scaffold00005.5_C, whole genome shotgun sequence 316,549
NZ_AULQ01000007.1 Mesoflavibacter zeaxanthinifaciens DSM 18436 H574DRAFT_scaffold00006.6_C, whole genome shotgun sequence 224,502
NZ_AULQ01000008.1 Mesoflavibacter zeaxanthinifaciens DSM 18436 H574DRAFT_scaffold00007.7_C, whole genome shotgun sequence 196,536
NZ_AULQ01000009.1 Mesoflavibacter zeaxanthinifaciens DSM 18436 H574DRAFT_scaffold00008.8_C, whole genome shotgun sequence 155,341
NZ_AULQ01000010.1 Mesoflavibacter zeaxanthinifaciens DSM 18436 H574DRAFT_scaffold00009.9_C, whole genome shotgun sequence 125,763
NZ_AULQ01000011.1 Mesoflavibacter zeaxanthinifaciens DSM 18436 H574DRAFT_scaffold00010.10_C, whole genome shotgun sequence 119,735
NZ_AULQ01000012.1 Mesoflavibacter zeaxanthinifaciens DSM 18436 H574DRAFT_scaffold00011.11_C, whole genome shotgun sequence 85,571
NZ_AULQ01000013.1 Mesoflavibacter zeaxanthinifaciens DSM 18436 H574DRAFT_scaffold00012.12_C, whole genome shotgun sequence 10,929
NZ_AULQ01000014.1 Mesoflavibacter zeaxanthinifaciens DSM 18436 H574DRAFT_scaffold00013.13_C, whole genome shotgun sequence 9,219
NZ_AULQ01000015.1 Mesoflavibacter zeaxanthinifaciens DSM 18436 H574DRAFT_scaffold00014.14_C, whole genome shotgun sequence 6,644
NZ_AULQ01000016.1 Mesoflavibacter zeaxanthinifaciens DSM 18436 H574DRAFT_scaffold00015.15_C, whole genome shotgun sequence 5,669
NZ_AULQ01000017.1 Mesoflavibacter zeaxanthinifaciens DSM 18436 H574DRAFT_scaffold00016.16_C, whole genome shotgun sequence 2,906
NZ_AULQ01000018.1 Mesoflavibacter zeaxanthinifaciens DSM 18436 H574DRAFT_scaffold00017.17_C, whole genome shotgun sequence 2,624
NZ_AULQ01000019.1 Mesoflavibacter zeaxanthinifaciens DSM 18436 H574DRAFT_scaffold00018.18_C, whole genome shotgun sequence 1,815
NZ_AULQ01000020.1 Mesoflavibacter zeaxanthinifaciens DSM 18436 H574DRAFT_scaffold00019.19_C, whole genome shotgun sequence 1,478
NZ_AULQ01000021.1 Mesoflavibacter zeaxanthinifaciens DSM 18436 H574DRAFT_scaffold00020.20_C, whole genome shotgun sequence 1,283
NZ_AULQ01000022.1 Mesoflavibacter zeaxanthinifaciens DSM 18436 H574DRAFT_scaffold00021.21_C, whole genome shotgun sequence 1,092
NZ_KE383820.1 Mesoflavibacter zeaxanthinifaciens DSM 18436 H574DRAFT_scaffold00003.3, whole genome shotgun sequence 376,411

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory