fast.genomicscompare 6,575 genera of bacteria & archaea

 

Gramella echinicola DSM 19838

Genome identifier: GCF_000423065.1

NCBI assembly name: ASM42306v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Flavobacteriales, Flavobacteriaceae, Gramella, Gramella echinicola

NCBI taxonomy: Bacteria, Bacteroidota, Flavobacteriia, Flavobacteriales, Flavobacteriaceae, Christiangramia, Christiangramia echinicola

Scaffolds: 18

Genes: 3,203 Protein-coding: 3,144 RNAs: 50 pseudogenes: 9

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_AUHG01000001.1 Christiangramia echinicola DSM 19838 G530DRAFT_scaffold00010.10_C, whole genome shotgun sequence 33,620
NZ_AUHG01000002.1 Christiangramia echinicola DSM 19838 G530DRAFT_scaffold00011.11_C, whole genome shotgun sequence 14,072
NZ_AUHG01000003.1 Christiangramia echinicola DSM 19838 G530DRAFT_scaffold00012.12_C, whole genome shotgun sequence 13,168
NZ_AUHG01000004.1 Christiangramia echinicola DSM 19838 G530DRAFT_scaffold00013.13_C, whole genome shotgun sequence 7,127
NZ_AUHG01000005.1 Christiangramia echinicola DSM 19838 G530DRAFT_scaffold00014.14_C, whole genome shotgun sequence 6,680
NZ_AUHG01000006.1 Christiangramia echinicola DSM 19838 G530DRAFT_scaffold00015.15_C, whole genome shotgun sequence 3,810
NZ_AUHG01000007.1 Christiangramia echinicola DSM 19838 G530DRAFT_scaffold00016.16_C, whole genome shotgun sequence 1,425
NZ_AUHG01000008.1 Christiangramia echinicola DSM 19838 G530DRAFT_scaffold00017.17_C, whole genome shotgun sequence 1,239
NZ_AUHG01000009.1 Christiangramia echinicola DSM 19838 G530DRAFT_scaffold00018.18_C, whole genome shotgun sequence 1,171
NZ_AUHG01000010.1 Christiangramia echinicola DSM 19838 G530DRAFT_scaffold00001.1_C, whole genome shotgun sequence 971,266
NZ_AUHG01000011.1 Christiangramia echinicola DSM 19838 G530DRAFT_scaffold00002.2_C, whole genome shotgun sequence 927,778
NZ_AUHG01000012.1 Christiangramia echinicola DSM 19838 G530DRAFT_scaffold00003.3_C, whole genome shotgun sequence 512,525
NZ_AUHG01000016.1 Christiangramia echinicola DSM 19838 G530DRAFT_scaffold00005.5_C, whole genome shotgun sequence 226,671
NZ_AUHG01000017.1 Christiangramia echinicola DSM 19838 G530DRAFT_scaffold00006.6_C, whole genome shotgun sequence 174,163
NZ_AUHG01000018.1 Christiangramia echinicola DSM 19838 G530DRAFT_scaffold00007.7_C, whole genome shotgun sequence 171,304
NZ_AUHG01000019.1 Christiangramia echinicola DSM 19838 G530DRAFT_scaffold00008.8_C, whole genome shotgun sequence 158,063
NZ_AUHG01000020.1 Christiangramia echinicola DSM 19838 G530DRAFT_scaffold00009.9_C, whole genome shotgun sequence 62,117
NZ_KE383973.1 Christiangramia echinicola DSM 19838 G530DRAFT_scaffold00004.4, whole genome shotgun sequence 227,627

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory