fast.genomicscompare 6,575 genera of bacteria & archaea

 

Inquilinus limosus DSM 16000

Genome identifier: GCF_000423185.1

NCBI assembly name: ASM42318v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, DSM-16000, Inquilinaceae, Inquilinus, Inquilinus limosus

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodospirillales, Rhodospirillaceae, Inquilinus, Inquilinus limosus

Scaffolds: 64

Genes: 7,101 Protein-coding: 6,987 RNAs: 75 pseudogenes: 39

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_AUHM01000001.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00001.1_C, whole genome shotgun sequence 806,732
NZ_AUHM01000002.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00002.2_C, whole genome shotgun sequence 695,146
NZ_AUHM01000005.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00004.4_C, whole genome shotgun sequence 399,321
NZ_AUHM01000006.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00005.5_C, whole genome shotgun sequence 389,760
NZ_AUHM01000009.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00007.7_C, whole genome shotgun sequence 263,858
NZ_AUHM01000010.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00008.8_C, whole genome shotgun sequence 226,385
NZ_AUHM01000013.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00010.10_C, whole genome shotgun sequence 209,490
NZ_AUHM01000014.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00011.11_C, whole genome shotgun sequence 198,398
NZ_AUHM01000015.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00012.12_C, whole genome shotgun sequence 195,659
NZ_AUHM01000018.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00014.14_C, whole genome shotgun sequence 162,107
NZ_AUHM01000019.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00015.15_C, whole genome shotgun sequence 150,116
NZ_AUHM01000020.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00016.16_C, whole genome shotgun sequence 145,214
NZ_AUHM01000021.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00017.17_C, whole genome shotgun sequence 140,164
NZ_AUHM01000022.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00018.18_C, whole genome shotgun sequence 134,631
NZ_AUHM01000023.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00019.19_C, whole genome shotgun sequence 130,985
NZ_AUHM01000024.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00020.20_C, whole genome shotgun sequence 130,170
NZ_AUHM01000025.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00021.21_C, whole genome shotgun sequence 129,071
NZ_AUHM01000029.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00023.23_C, whole genome shotgun sequence 116,128
NZ_AUHM01000030.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00024.24_C, whole genome shotgun sequence 111,510
NZ_AUHM01000031.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00025.25_C, whole genome shotgun sequence 110,755
NZ_AUHM01000032.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00026.26_C, whole genome shotgun sequence 101,869
NZ_AUHM01000033.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00027.27_C, whole genome shotgun sequence 100,942
NZ_AUHM01000034.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00028.28_C, whole genome shotgun sequence 96,219
NZ_AUHM01000035.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00029.29_C, whole genome shotgun sequence 88,579
NZ_AUHM01000036.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00030.30_C, whole genome shotgun sequence 85,944
NZ_AUHM01000037.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00031.31_C, whole genome shotgun sequence 81,282
NZ_AUHM01000038.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00032.32_C, whole genome shotgun sequence 79,204
NZ_AUHM01000039.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00033.33_C, whole genome shotgun sequence 67,700
NZ_AUHM01000040.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00034.34_C, whole genome shotgun sequence 67,293
NZ_AUHM01000041.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00035.35_C, whole genome shotgun sequence 58,707
NZ_AUHM01000042.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00036.36_C, whole genome shotgun sequence 48,953
NZ_AUHM01000043.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00037.37_C, whole genome shotgun sequence 44,066
NZ_AUHM01000044.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00038.38_C, whole genome shotgun sequence 43,754
NZ_AUHM01000045.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00039.39_C, whole genome shotgun sequence 42,652
NZ_AUHM01000046.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00040.40_C, whole genome shotgun sequence 38,273
NZ_AUHM01000047.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00041.41_C, whole genome shotgun sequence 35,499
NZ_AUHM01000048.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00042.42_C, whole genome shotgun sequence 29,373
NZ_AUHM01000049.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00043.43_C, whole genome shotgun sequence 26,271
NZ_AUHM01000050.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00044.44_C, whole genome shotgun sequence 25,449
NZ_AUHM01000051.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00045.45_C, whole genome shotgun sequence 24,585
NZ_AUHM01000052.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00046.46_C, whole genome shotgun sequence 20,918
NZ_AUHM01000053.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00047.47_C, whole genome shotgun sequence 18,172
NZ_AUHM01000054.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00048.48_C, whole genome shotgun sequence 17,099
NZ_AUHM01000055.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00049.49_C, whole genome shotgun sequence 15,113
NZ_AUHM01000056.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00050.50_C, whole genome shotgun sequence 13,397
NZ_AUHM01000057.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00051.51_C, whole genome shotgun sequence 9,583
NZ_AUHM01000058.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00052.52_C, whole genome shotgun sequence 8,703
NZ_AUHM01000059.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00053.53_C, whole genome shotgun sequence 7,755
NZ_AUHM01000060.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00054.54_C, whole genome shotgun sequence 7,390
NZ_AUHM01000061.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00055.55_C, whole genome shotgun sequence 3,496
NZ_AUHM01000062.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00056.56_C, whole genome shotgun sequence 2,346
NZ_AUHM01000063.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00057.57_C, whole genome shotgun sequence 1,986
NZ_AUHM01000064.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00058.58_C, whole genome shotgun sequence 1,855
NZ_AUHM01000065.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00059.59_C, whole genome shotgun sequence 1,669
NZ_AUHM01000066.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00060.60_C, whole genome shotgun sequence 1,508
NZ_AUHM01000067.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00061.61_C, whole genome shotgun sequence 1,505
NZ_AUHM01000068.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00062.62_C, whole genome shotgun sequence 1,370
NZ_AUHM01000069.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00063.63_C, whole genome shotgun sequence 1,100
NZ_AUHM01000070.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00064.64_C, whole genome shotgun sequence 1,021
NZ_KE383985.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00003.3, whole genome shotgun sequence 411,936
NZ_KE383986.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00006.6, whole genome shotgun sequence 306,631
NZ_KE383987.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00009.9, whole genome shotgun sequence 214,304
NZ_KE383988.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00013.13, whole genome shotgun sequence 183,680
NZ_KE383989.1 Inquilinus limosus DSM 16000 G537DRAFT_scaffold00022.22, whole genome shotgun sequence 128,963

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory