fast.genomicscompare 6,575 genera of bacteria & archaea

 

Proteocatella sphenisci DSM 23131

Genome identifier: GCF_000423525.1

NCBI assembly name: ASM42352v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Peptostreptococcales, Filifactoraceae, Proteocatella, Proteocatella sphenisci

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Peptostreptococcaceae, Proteocatella, Proteocatella sphenisci

Scaffolds: 45

Genes: 2,346 Protein-coding: 2,277 RNAs: 55 pseudogenes: 14

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_AUID01000001.1 Proteocatella sphenisci DSM 23131 G558DRAFT_scaffold00001.1_C, whole genome shotgun sequence 209,014
NZ_AUID01000002.1 Proteocatella sphenisci DSM 23131 G558DRAFT_scaffold00002.2_C, whole genome shotgun sequence 175,648
NZ_AUID01000003.1 Proteocatella sphenisci DSM 23131 G558DRAFT_scaffold00003.3_C, whole genome shotgun sequence 168,674
NZ_AUID01000006.1 Proteocatella sphenisci DSM 23131 G558DRAFT_scaffold00005.5_C, whole genome shotgun sequence 137,473
NZ_AUID01000007.1 Proteocatella sphenisci DSM 23131 G558DRAFT_scaffold00006.6_C, whole genome shotgun sequence 117,029
NZ_AUID01000008.1 Proteocatella sphenisci DSM 23131 G558DRAFT_scaffold00007.7_C, whole genome shotgun sequence 113,852
NZ_AUID01000009.1 Proteocatella sphenisci DSM 23131 G558DRAFT_scaffold00008.8_C, whole genome shotgun sequence 95,413
NZ_AUID01000010.1 Proteocatella sphenisci DSM 23131 G558DRAFT_scaffold00009.9_C, whole genome shotgun sequence 90,872
NZ_AUID01000011.1 Proteocatella sphenisci DSM 23131 G558DRAFT_scaffold00010.10_C, whole genome shotgun sequence 83,678
NZ_AUID01000012.1 Proteocatella sphenisci DSM 23131 G558DRAFT_scaffold00011.11_C, whole genome shotgun sequence 83,650
NZ_AUID01000013.1 Proteocatella sphenisci DSM 23131 G558DRAFT_scaffold00012.12_C, whole genome shotgun sequence 80,482
NZ_AUID01000014.1 Proteocatella sphenisci DSM 23131 G558DRAFT_scaffold00013.13_C, whole genome shotgun sequence 69,624
NZ_AUID01000015.1 Proteocatella sphenisci DSM 23131 G558DRAFT_scaffold00014.14_C, whole genome shotgun sequence 68,108
NZ_AUID01000016.1 Proteocatella sphenisci DSM 23131 G558DRAFT_scaffold00015.15_C, whole genome shotgun sequence 67,439
NZ_AUID01000017.1 Proteocatella sphenisci DSM 23131 G558DRAFT_scaffold00016.16_C, whole genome shotgun sequence 66,358
NZ_AUID01000018.1 Proteocatella sphenisci DSM 23131 G558DRAFT_scaffold00017.17_C, whole genome shotgun sequence 60,177
NZ_AUID01000019.1 Proteocatella sphenisci DSM 23131 G558DRAFT_scaffold00018.18_C, whole genome shotgun sequence 57,691
NZ_AUID01000020.1 Proteocatella sphenisci DSM 23131 G558DRAFT_scaffold00019.19_C, whole genome shotgun sequence 52,558
NZ_AUID01000021.1 Proteocatella sphenisci DSM 23131 G558DRAFT_scaffold00020.20_C, whole genome shotgun sequence 47,896
NZ_AUID01000022.1 Proteocatella sphenisci DSM 23131 G558DRAFT_scaffold00021.21_C, whole genome shotgun sequence 46,354
NZ_AUID01000023.1 Proteocatella sphenisci DSM 23131 G558DRAFT_scaffold00022.22_C, whole genome shotgun sequence 43,763
NZ_AUID01000024.1 Proteocatella sphenisci DSM 23131 G558DRAFT_scaffold00023.23_C, whole genome shotgun sequence 36,951
NZ_AUID01000025.1 Proteocatella sphenisci DSM 23131 G558DRAFT_scaffold00024.24_C, whole genome shotgun sequence 33,044
NZ_AUID01000026.1 Proteocatella sphenisci DSM 23131 G558DRAFT_scaffold00025.25_C, whole genome shotgun sequence 32,036
NZ_AUID01000027.1 Proteocatella sphenisci DSM 23131 G558DRAFT_scaffold00026.26_C, whole genome shotgun sequence 23,773
NZ_AUID01000028.1 Proteocatella sphenisci DSM 23131 G558DRAFT_scaffold00027.27_C, whole genome shotgun sequence 21,535
NZ_AUID01000029.1 Proteocatella sphenisci DSM 23131 G558DRAFT_scaffold00028.28_C, whole genome shotgun sequence 21,191
NZ_AUID01000030.1 Proteocatella sphenisci DSM 23131 G558DRAFT_scaffold00029.29_C, whole genome shotgun sequence 19,438
NZ_AUID01000031.1 Proteocatella sphenisci DSM 23131 G558DRAFT_scaffold00030.30_C, whole genome shotgun sequence 17,972
NZ_AUID01000032.1 Proteocatella sphenisci DSM 23131 G558DRAFT_scaffold00031.31_C, whole genome shotgun sequence 17,342
NZ_AUID01000033.1 Proteocatella sphenisci DSM 23131 G558DRAFT_scaffold00032.32_C, whole genome shotgun sequence 16,961
NZ_AUID01000034.1 Proteocatella sphenisci DSM 23131 G558DRAFT_scaffold00033.33_C, whole genome shotgun sequence 16,650
NZ_AUID01000035.1 Proteocatella sphenisci DSM 23131 G558DRAFT_scaffold00034.34_C, whole genome shotgun sequence 15,702
NZ_AUID01000038.1 Proteocatella sphenisci DSM 23131 G558DRAFT_scaffold00036.36_C, whole genome shotgun sequence 11,800
NZ_AUID01000039.1 Proteocatella sphenisci DSM 23131 G558DRAFT_scaffold00037.37_C, whole genome shotgun sequence 8,136
NZ_AUID01000040.1 Proteocatella sphenisci DSM 23131 G558DRAFT_scaffold00038.38_C, whole genome shotgun sequence 6,472
NZ_AUID01000041.1 Proteocatella sphenisci DSM 23131 G558DRAFT_scaffold00039.39_C, whole genome shotgun sequence 5,150
NZ_AUID01000042.1 Proteocatella sphenisci DSM 23131 G558DRAFT_scaffold00040.40_C, whole genome shotgun sequence 3,797
NZ_AUID01000043.1 Proteocatella sphenisci DSM 23131 G558DRAFT_scaffold00041.41_C, whole genome shotgun sequence 3,510
NZ_AUID01000044.1 Proteocatella sphenisci DSM 23131 G558DRAFT_scaffold00042.42_C, whole genome shotgun sequence 2,900
NZ_AUID01000045.1 Proteocatella sphenisci DSM 23131 G558DRAFT_scaffold00043.43_C, whole genome shotgun sequence 2,180
NZ_AUID01000046.1 Proteocatella sphenisci DSM 23131 G558DRAFT_scaffold00044.44_C, whole genome shotgun sequence 1,957
NZ_AUID01000047.1 Proteocatella sphenisci DSM 23131 G558DRAFT_scaffold00045.45_C, whole genome shotgun sequence 1,162
NZ_KE384028.1 Proteocatella sphenisci DSM 23131 G558DRAFT_scaffold00004.4, whole genome shotgun sequence 142,731
NZ_KE384029.1 Proteocatella sphenisci DSM 23131 G558DRAFT_scaffold00035.35, whole genome shotgun sequence 12,912

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory