fast.genomicscompare 6,575 genera of bacteria & archaea

 

Sediminimonas qiaohouensis DSM 21189

Genome identifier: GCF_000423645.1

NCBI assembly name: ASM42364v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Sediminimonas, Sediminimonas qiaohouensis

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Roseobacteraceae, Sediminimonas, Sediminimonas qiaohouensis

Scaffolds: 67

Genes: 3,524 Protein-coding: 3,384 RNAs: 56 pseudogenes: 84

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_AUIJ01000001.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00001.1_C, whole genome shotgun sequence 475,853
NZ_AUIJ01000002.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00002.2_C, whole genome shotgun sequence 357,414
NZ_AUIJ01000003.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00003.3_C, whole genome shotgun sequence 184,202
NZ_AUIJ01000004.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00004.4_C, whole genome shotgun sequence 176,987
NZ_AUIJ01000005.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00005.5_C, whole genome shotgun sequence 176,362
NZ_AUIJ01000006.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00006.6_C, whole genome shotgun sequence 151,472
NZ_AUIJ01000007.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00007.7_C, whole genome shotgun sequence 149,104
NZ_AUIJ01000008.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00008.8_C, whole genome shotgun sequence 146,200
NZ_AUIJ01000009.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00009.9_C, whole genome shotgun sequence 144,570
NZ_AUIJ01000010.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00010.10_C, whole genome shotgun sequence 130,296
NZ_AUIJ01000011.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00011.11_C, whole genome shotgun sequence 120,452
NZ_AUIJ01000012.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00012.12_C, whole genome shotgun sequence 109,907
NZ_AUIJ01000013.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00013.13_C, whole genome shotgun sequence 102,997
NZ_AUIJ01000014.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00014.14_C, whole genome shotgun sequence 72,337
NZ_AUIJ01000015.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00015.15_C, whole genome shotgun sequence 71,584
NZ_AUIJ01000016.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00016.16_C, whole genome shotgun sequence 56,299
NZ_AUIJ01000017.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00017.17_C, whole genome shotgun sequence 52,818
NZ_AUIJ01000018.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00018.18_C, whole genome shotgun sequence 52,131
NZ_AUIJ01000019.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00019.19_C, whole genome shotgun sequence 51,210
NZ_AUIJ01000020.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00020.20_C, whole genome shotgun sequence 50,092
NZ_AUIJ01000023.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00022.22_C, whole genome shotgun sequence 42,763
NZ_AUIJ01000024.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00023.23_C, whole genome shotgun sequence 41,039
NZ_AUIJ01000025.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00024.24_C, whole genome shotgun sequence 40,519
NZ_AUIJ01000026.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00025.25_C, whole genome shotgun sequence 40,496
NZ_AUIJ01000027.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00026.26_C, whole genome shotgun sequence 38,178
NZ_AUIJ01000028.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00027.27_C, whole genome shotgun sequence 37,904
NZ_AUIJ01000029.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00028.28_C, whole genome shotgun sequence 36,394
NZ_AUIJ01000030.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00029.29_C, whole genome shotgun sequence 35,697
NZ_AUIJ01000031.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00030.30_C, whole genome shotgun sequence 35,123
NZ_AUIJ01000032.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00031.31_C, whole genome shotgun sequence 31,323
NZ_AUIJ01000033.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00032.32_C, whole genome shotgun sequence 29,220
NZ_AUIJ01000034.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00033.33_C, whole genome shotgun sequence 27,757
NZ_AUIJ01000035.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00034.34_C, whole genome shotgun sequence 24,294
NZ_AUIJ01000036.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00035.35_C, whole genome shotgun sequence 23,652
NZ_AUIJ01000037.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00036.36_C, whole genome shotgun sequence 17,177
NZ_AUIJ01000038.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00037.37_C, whole genome shotgun sequence 16,496
NZ_AUIJ01000039.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00038.38_C, whole genome shotgun sequence 16,274
NZ_AUIJ01000040.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00039.39_C, whole genome shotgun sequence 12,496
NZ_AUIJ01000041.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00040.40_C, whole genome shotgun sequence 11,177
NZ_AUIJ01000042.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00041.41_C, whole genome shotgun sequence 10,287
NZ_AUIJ01000043.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00042.42_C, whole genome shotgun sequence 9,527
NZ_AUIJ01000044.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00043.43_C, whole genome shotgun sequence 9,311
NZ_AUIJ01000045.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00044.44_C, whole genome shotgun sequence 9,017
NZ_AUIJ01000046.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00045.45_C, whole genome shotgun sequence 8,685
NZ_AUIJ01000047.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00046.46_C, whole genome shotgun sequence 8,133
NZ_AUIJ01000048.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00047.47_C, whole genome shotgun sequence 6,190
NZ_AUIJ01000049.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00048.48_C, whole genome shotgun sequence 4,625
NZ_AUIJ01000050.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00049.49_C, whole genome shotgun sequence 4,539
NZ_AUIJ01000051.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00050.50_C, whole genome shotgun sequence 4,513
NZ_AUIJ01000052.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00051.51_C, whole genome shotgun sequence 4,507
NZ_AUIJ01000053.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00052.52_C, whole genome shotgun sequence 4,465
NZ_AUIJ01000054.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00053.53_C, whole genome shotgun sequence 4,463
NZ_AUIJ01000055.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00054.54_C, whole genome shotgun sequence 3,943
NZ_AUIJ01000056.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00055.55_C, whole genome shotgun sequence 3,597
NZ_AUIJ01000057.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00056.56_C, whole genome shotgun sequence 3,350
NZ_AUIJ01000058.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00057.57_C, whole genome shotgun sequence 3,257
NZ_AUIJ01000059.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00058.58_C, whole genome shotgun sequence 2,384
NZ_AUIJ01000060.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00059.59_C, whole genome shotgun sequence 2,365
NZ_AUIJ01000061.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00060.60_C, whole genome shotgun sequence 2,334
NZ_AUIJ01000062.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00061.61_C, whole genome shotgun sequence 2,167
NZ_AUIJ01000063.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00062.62_C, whole genome shotgun sequence 1,886
NZ_AUIJ01000064.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00063.63_C, whole genome shotgun sequence 1,764
NZ_AUIJ01000065.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00064.64_C, whole genome shotgun sequence 1,668
NZ_AUIJ01000066.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00065.65_C, whole genome shotgun sequence 1,525
NZ_AUIJ01000067.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00066.66_C, whole genome shotgun sequence 1,317
NZ_AUIJ01000068.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00067.67_C, whole genome shotgun sequence 1,047
NZ_KE384068.1 Sediminimonas qiaohouensis DSM 21189 G568DRAFT_scaffold00021.21, whole genome shotgun sequence 43,850

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory