fast.genomicscompare 6,575 genera of bacteria & archaea

 

Methylococcus capsulatus ATCC 19069

Genome identifier: GCF_000424685.1

NCBI assembly name: ASM42468v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Methylococcales, Methylococcaceae, Methylococcus, Methylococcus capsulatus

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Methylococcales, Methylococcaceae, Methylococcus, Methylococcus capsulatus

Scaffolds: 20

Genes: 3,067 Protein-coding: 2,960 RNAs: 66 pseudogenes: 41

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_AUKJ01000003.1 Methylococcus capsulatus str. Texas = ATCC 19069 H156DRAFT_scaffold00011.11_C, whole genome shotgun sequence 85,610
NZ_AUKJ01000004.1 Methylococcus capsulatus str. Texas = ATCC 19069 H156DRAFT_scaffold00012.12_C, whole genome shotgun sequence 78,814
NZ_AUKJ01000005.1 Methylococcus capsulatus str. Texas = ATCC 19069 H156DRAFT_scaffold00013.13_C, whole genome shotgun sequence 72,976
NZ_AUKJ01000006.1 Methylococcus capsulatus str. Texas = ATCC 19069 H156DRAFT_scaffold00014.14_C, whole genome shotgun sequence 67,485
NZ_AUKJ01000007.1 Methylococcus capsulatus str. Texas = ATCC 19069 H156DRAFT_scaffold00015.15_C, whole genome shotgun sequence 65,760
NZ_AUKJ01000008.1 Methylococcus capsulatus str. Texas = ATCC 19069 H156DRAFT_scaffold00016.16_C, whole genome shotgun sequence 49,459
NZ_AUKJ01000009.1 Methylococcus capsulatus str. Texas = ATCC 19069 H156DRAFT_scaffold00017.17_C, whole genome shotgun sequence 17,278
NZ_AUKJ01000010.1 Methylococcus capsulatus str. Texas = ATCC 19069 H156DRAFT_scaffold00018.18_C, whole genome shotgun sequence 2,329
NZ_AUKJ01000011.1 Methylococcus capsulatus str. Texas = ATCC 19069 H156DRAFT_scaffold00019.19_C, whole genome shotgun sequence 1,605
NZ_AUKJ01000015.1 Methylococcus capsulatus str. Texas = ATCC 19069 H156DRAFT_scaffold00020.20_C, whole genome shotgun sequence 1,090
NZ_AUKJ01000016.1 Methylococcus capsulatus str. Texas = ATCC 19069 H156DRAFT_scaffold00002.2_C, whole genome shotgun sequence 522,133
NZ_AUKJ01000017.1 Methylococcus capsulatus str. Texas = ATCC 19069 H156DRAFT_scaffold00003.3_C, whole genome shotgun sequence 319,698
NZ_AUKJ01000018.1 Methylococcus capsulatus str. Texas = ATCC 19069 H156DRAFT_scaffold00004.4_C, whole genome shotgun sequence 301,813
NZ_AUKJ01000019.1 Methylococcus capsulatus str. Texas = ATCC 19069 H156DRAFT_scaffold00005.5_C, whole genome shotgun sequence 214,802
NZ_AUKJ01000020.1 Methylococcus capsulatus str. Texas = ATCC 19069 H156DRAFT_scaffold00006.6_C, whole genome shotgun sequence 170,930
NZ_AUKJ01000021.1 Methylococcus capsulatus str. Texas = ATCC 19069 H156DRAFT_scaffold00007.7_C, whole genome shotgun sequence 167,861
NZ_AUKJ01000022.1 Methylococcus capsulatus str. Texas = ATCC 19069 H156DRAFT_scaffold00008.8_C, whole genome shotgun sequence 133,379
NZ_AUKJ01000023.1 Methylococcus capsulatus str. Texas = ATCC 19069 H156DRAFT_scaffold00009.9_C, whole genome shotgun sequence 113,411
NZ_KE384224.1 Methylococcus capsulatus str. Texas = ATCC 19069 H156DRAFT_scaffold00001.1, whole genome shotgun sequence 787,148
NZ_KE384225.1 Methylococcus capsulatus str. Texas = ATCC 19069 H156DRAFT_scaffold00010.10, whole genome shotgun sequence 92,682

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory