fast.genomicscompare 6,575 genera of bacteria & archaea

 

Gaetbulibacter saemankumensis DSM 17032

Genome identifier: GCF_000425645.1

NCBI assembly name: ASM42564v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Flavobacteriales, Flavobacteriaceae, Gaetbulibacter, Gaetbulibacter saemankumensis

NCBI taxonomy: Bacteria, Bacteroidota, Flavobacteriia, Flavobacteriales, Flavobacteriaceae, Gaetbulibacter, Gaetbulibacter saemankumensis

Scaffolds: 11

Genes: 2,699 Protein-coding: 2,641 RNAs: 50 pseudogenes: 8

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_AUDV01000001.1 Gaetbulibacter saemankumensis DSM 17032 H611DRAFT_scaffold00010.10_C, whole genome shotgun sequence 2,419
NZ_AUDV01000002.1 Gaetbulibacter saemankumensis DSM 17032 H611DRAFT_scaffold00011.11_C, whole genome shotgun sequence 1,585
NZ_AUDV01000005.1 Gaetbulibacter saemankumensis DSM 17032 H611DRAFT_scaffold00002.2_C, whole genome shotgun sequence 510,693
NZ_AUDV01000006.1 Gaetbulibacter saemankumensis DSM 17032 H611DRAFT_scaffold00003.3_C, whole genome shotgun sequence 499,653
NZ_AUDV01000007.1 Gaetbulibacter saemankumensis DSM 17032 H611DRAFT_scaffold00004.4_C, whole genome shotgun sequence 282,375
NZ_AUDV01000008.1 Gaetbulibacter saemankumensis DSM 17032 H611DRAFT_scaffold00005.5_C, whole genome shotgun sequence 180,997
NZ_AUDV01000009.1 Gaetbulibacter saemankumensis DSM 17032 H611DRAFT_scaffold00006.6_C, whole genome shotgun sequence 34,006
NZ_AUDV01000010.1 Gaetbulibacter saemankumensis DSM 17032 H611DRAFT_scaffold00007.7_C, whole genome shotgun sequence 7,079
NZ_AUDV01000011.1 Gaetbulibacter saemankumensis DSM 17032 H611DRAFT_scaffold00008.8_C, whole genome shotgun sequence 5,712
NZ_AUDV01000012.1 Gaetbulibacter saemankumensis DSM 17032 H611DRAFT_scaffold00009.9_C, whole genome shotgun sequence 2,865
NZ_KE384430.1 Gaetbulibacter saemankumensis DSM 17032 H611DRAFT_scaffold00001.1, whole genome shotgun sequence 1,561,765

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory