fast.genomicscompare 6,575 genera of bacteria & archaea

 

Salinarimonas rosea DSM 21201

Genome identifier: GCF_000429045.1

NCBI assembly name: ASM42904v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Beijerinckiaceae, Salinarimonas, Salinarimonas rosea

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Salinarimonadaceae, Salinarimonas, Salinarimonas rosea

Scaffolds: 56

Genes: 4,950 Protein-coding: 4,848 RNAs: 53 pseudogenes: 49

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_AUBC01000001.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00001.1_C, whole genome shotgun sequence 473,686
NZ_AUBC01000004.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00003.3_C, whole genome shotgun sequence 306,566
NZ_AUBC01000005.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00004.4_C, whole genome shotgun sequence 284,731
NZ_AUBC01000006.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00005.5_C, whole genome shotgun sequence 278,547
NZ_AUBC01000007.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00006.6_C, whole genome shotgun sequence 277,613
NZ_AUBC01000010.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00008.8_C, whole genome shotgun sequence 246,088
NZ_AUBC01000011.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00009.9_C, whole genome shotgun sequence 220,202
NZ_AUBC01000012.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00010.10_C, whole genome shotgun sequence 208,534
NZ_AUBC01000013.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00011.11_C, whole genome shotgun sequence 179,962
NZ_AUBC01000014.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00012.12_C, whole genome shotgun sequence 175,875
NZ_AUBC01000015.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00013.13_C, whole genome shotgun sequence 174,948
NZ_AUBC01000016.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00014.14_C, whole genome shotgun sequence 166,612
NZ_AUBC01000017.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00015.15_C, whole genome shotgun sequence 144,257
NZ_AUBC01000018.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00016.16_C, whole genome shotgun sequence 140,657
NZ_AUBC01000019.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00017.17_C, whole genome shotgun sequence 119,804
NZ_AUBC01000020.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00018.18_C, whole genome shotgun sequence 91,898
NZ_AUBC01000023.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00020.20_C, whole genome shotgun sequence 88,715
NZ_AUBC01000024.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00021.21_C, whole genome shotgun sequence 88,105
NZ_AUBC01000025.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00022.22_C, whole genome shotgun sequence 79,214
NZ_AUBC01000026.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00023.23_C, whole genome shotgun sequence 63,356
NZ_AUBC01000027.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00024.24_C, whole genome shotgun sequence 63,104
NZ_AUBC01000028.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00025.25_C, whole genome shotgun sequence 55,619
NZ_AUBC01000029.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00026.26_C, whole genome shotgun sequence 51,133
NZ_AUBC01000030.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00027.27_C, whole genome shotgun sequence 50,161
NZ_AUBC01000031.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00028.28_C, whole genome shotgun sequence 45,460
NZ_AUBC01000032.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00029.29_C, whole genome shotgun sequence 38,897
NZ_AUBC01000033.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00030.30_C, whole genome shotgun sequence 36,760
NZ_AUBC01000034.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00031.31_C, whole genome shotgun sequence 36,122
NZ_AUBC01000035.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00032.32_C, whole genome shotgun sequence 35,297
NZ_AUBC01000036.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00033.33_C, whole genome shotgun sequence 33,110
NZ_AUBC01000037.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00034.34_C, whole genome shotgun sequence 31,457
NZ_AUBC01000038.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00035.35_C, whole genome shotgun sequence 30,962
NZ_AUBC01000039.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00036.36_C, whole genome shotgun sequence 25,416
NZ_AUBC01000040.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00037.37_C, whole genome shotgun sequence 19,516
NZ_AUBC01000041.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00038.38_C, whole genome shotgun sequence 18,073
NZ_AUBC01000042.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00039.39_C, whole genome shotgun sequence 14,018
NZ_AUBC01000043.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00040.40_C, whole genome shotgun sequence 12,171
NZ_AUBC01000044.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00041.41_C, whole genome shotgun sequence 11,746
NZ_AUBC01000045.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00042.42_C, whole genome shotgun sequence 9,939
NZ_AUBC01000046.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00043.43_C, whole genome shotgun sequence 8,774
NZ_AUBC01000047.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00044.44_C, whole genome shotgun sequence 8,739
NZ_AUBC01000048.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00045.45_C, whole genome shotgun sequence 7,983
NZ_AUBC01000049.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00046.46_C, whole genome shotgun sequence 5,463
NZ_AUBC01000050.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00047.47_C, whole genome shotgun sequence 3,874
NZ_AUBC01000051.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00048.48_C, whole genome shotgun sequence 3,001
NZ_AUBC01000052.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00049.49_C, whole genome shotgun sequence 2,780
NZ_AUBC01000053.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00050.50_C, whole genome shotgun sequence 2,629
NZ_AUBC01000054.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00051.51_C, whole genome shotgun sequence 2,497
NZ_AUBC01000055.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00052.52_C, whole genome shotgun sequence 2,383
NZ_AUBC01000056.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00053.53_C, whole genome shotgun sequence 2,262
NZ_AUBC01000057.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00054.54_C, whole genome shotgun sequence 2,002
NZ_AUBC01000058.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00055.55_C, whole genome shotgun sequence 1,576
NZ_AUBC01000059.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00056.56_C, whole genome shotgun sequence 1,087
NZ_KE386841.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00002.2, whole genome shotgun sequence 419,708
NZ_KE386842.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00007.7, whole genome shotgun sequence 251,159
NZ_KE386843.1 Salinarimonas rosea DSM 21201 G407DRAFT_scaffold00019.19, whole genome shotgun sequence 91,073

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory