fast.genomicscompare 6,575 genera of bacteria & archaea

 

Azospirillum halopraeferens DSM 3675

Genome identifier: GCF_000429625.1

NCBI assembly name: ASM42962v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Azospirillales, Azospirillaceae, Azospirillum, Azospirillum halopraeferens

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodospirillales, Azospirillaceae, Azospirillum, Azospirillum halopraeferens

Scaffolds: 50

Genes: 6,084 Protein-coding: 5,936 RNAs: 74 pseudogenes: 74

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_AUCF01000001.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00001.1_C, whole genome shotgun sequence 778,219
NZ_AUCF01000004.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00003.3_C, whole genome shotgun sequence 578,944
NZ_AUCF01000005.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00004.4_C, whole genome shotgun sequence 348,082
NZ_AUCF01000006.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00005.5_C, whole genome shotgun sequence 345,579
NZ_AUCF01000009.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00007.7_C, whole genome shotgun sequence 268,302
NZ_AUCF01000010.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00008.8_C, whole genome shotgun sequence 218,753
NZ_AUCF01000011.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00009.9_C, whole genome shotgun sequence 214,608
NZ_AUCF01000012.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00010.10_C, whole genome shotgun sequence 195,529
NZ_AUCF01000013.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00011.11_C, whole genome shotgun sequence 192,557
NZ_AUCF01000014.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00012.12_C, whole genome shotgun sequence 178,243
NZ_AUCF01000015.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00013.13_C, whole genome shotgun sequence 164,983
NZ_AUCF01000016.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00014.14_C, whole genome shotgun sequence 155,117
NZ_AUCF01000017.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00015.15_C, whole genome shotgun sequence 148,205
NZ_AUCF01000020.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00017.17_C, whole genome shotgun sequence 130,947
NZ_AUCF01000021.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00018.18_C, whole genome shotgun sequence 116,209
NZ_AUCF01000026.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00021.21_C, whole genome shotgun sequence 106,705
NZ_AUCF01000027.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00022.22_C, whole genome shotgun sequence 101,906
NZ_AUCF01000028.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00023.23_C, whole genome shotgun sequence 76,890
NZ_AUCF01000029.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00024.24_C, whole genome shotgun sequence 74,429
NZ_AUCF01000030.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00025.25_C, whole genome shotgun sequence 72,794
NZ_AUCF01000031.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00026.26_C, whole genome shotgun sequence 72,408
NZ_AUCF01000032.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00027.27_C, whole genome shotgun sequence 69,904
NZ_AUCF01000033.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00028.28_C, whole genome shotgun sequence 65,816
NZ_AUCF01000034.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00029.29_C, whole genome shotgun sequence 65,282
NZ_AUCF01000035.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00030.30_C, whole genome shotgun sequence 62,029
NZ_AUCF01000036.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00031.31_C, whole genome shotgun sequence 53,717
NZ_AUCF01000037.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00032.32_C, whole genome shotgun sequence 50,327
NZ_AUCF01000038.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00033.33_C, whole genome shotgun sequence 49,856
NZ_AUCF01000039.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00034.34_C, whole genome shotgun sequence 47,615
NZ_AUCF01000040.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00035.35_C, whole genome shotgun sequence 43,632
NZ_AUCF01000041.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00036.36_C, whole genome shotgun sequence 42,107
NZ_AUCF01000042.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00037.37_C, whole genome shotgun sequence 38,276
NZ_AUCF01000043.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00038.38_C, whole genome shotgun sequence 33,858
NZ_AUCF01000044.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00039.39_C, whole genome shotgun sequence 30,659
NZ_AUCF01000045.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00040.40_C, whole genome shotgun sequence 20,009
NZ_AUCF01000046.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00041.41_C, whole genome shotgun sequence 19,413
NZ_AUCF01000047.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00042.42_C, whole genome shotgun sequence 16,883
NZ_AUCF01000050.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00044.44_C, whole genome shotgun sequence 7,608
NZ_AUCF01000051.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00045.45_C, whole genome shotgun sequence 1,867
NZ_AUCF01000052.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00046.46_C, whole genome shotgun sequence 1,520
NZ_AUCF01000053.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00047.47_C, whole genome shotgun sequence 1,392
NZ_AUCF01000054.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00048.48_C, whole genome shotgun sequence 1,400
NZ_AUCF01000055.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00049.49_C, whole genome shotgun sequence 1,218
NZ_AUCF01000056.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00050.50_C, whole genome shotgun sequence 1,002
NZ_KE386927.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00002.2, whole genome shotgun sequence 594,172
NZ_KE386928.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00006.6, whole genome shotgun sequence 271,124
NZ_KE386929.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00016.16, whole genome shotgun sequence 144,391
NZ_KE386930.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00019.19, whole genome shotgun sequence 114,914
NZ_KE386931.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00020.20, whole genome shotgun sequence 107,527
NZ_KE386932.1 Azospirillum halopraeferens DSM 3675 G472DRAFT_scaffold00043.43, whole genome shotgun sequence 15,450

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory