fast.genomicscompare 6,575 genera of bacteria & archaea

 

Niveispirillum irakense DSM 11586

Genome identifier: GCF_000429645.1

NCBI assembly name: ASM42964v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Azospirillales, Azospirillaceae, Niveispirillum, Niveispirillum irakense

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodospirillales, Azospirillaceae, Niveispirillum, Niveispirillum irakense

Scaffolds: 20

Genes: 4,793 Protein-coding: 4,692 RNAs: 70 pseudogenes: 31

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_AUCG01000001.1 Niveispirillum irakense DSM 11586 G473DRAFT_scaffold00010.10_C, whole genome shotgun sequence 160,686
NZ_AUCG01000002.1 Niveispirillum irakense DSM 11586 G473DRAFT_scaffold00011.11_C, whole genome shotgun sequence 148,525
NZ_AUCG01000003.1 Niveispirillum irakense DSM 11586 G473DRAFT_scaffold00012.12_C, whole genome shotgun sequence 124,330
NZ_AUCG01000004.1 Niveispirillum irakense DSM 11586 G473DRAFT_scaffold00013.13_C, whole genome shotgun sequence 97,794
NZ_AUCG01000005.1 Niveispirillum irakense DSM 11586 G473DRAFT_scaffold00014.14_C, whole genome shotgun sequence 69,376
NZ_AUCG01000006.1 Niveispirillum irakense DSM 11586 G473DRAFT_scaffold00015.15_C, whole genome shotgun sequence 64,252
NZ_AUCG01000007.1 Niveispirillum irakense DSM 11586 G473DRAFT_scaffold00016.16_C, whole genome shotgun sequence 45,315
NZ_AUCG01000008.1 Niveispirillum irakense DSM 11586 G473DRAFT_scaffold00017.17_C, whole genome shotgun sequence 30,847
NZ_AUCG01000012.1 Niveispirillum irakense DSM 11586 G473DRAFT_scaffold00019.19_C, whole genome shotgun sequence 2,148
NZ_AUCG01000015.1 Niveispirillum irakense DSM 11586 G473DRAFT_scaffold00020.20_C, whole genome shotgun sequence 1,785
NZ_AUCG01000016.1 Niveispirillum irakense DSM 11586 G473DRAFT_scaffold00002.2_C, whole genome shotgun sequence 798,988
NZ_AUCG01000020.1 Niveispirillum irakense DSM 11586 G473DRAFT_scaffold00004.4_C, whole genome shotgun sequence 442,879
NZ_AUCG01000021.1 Niveispirillum irakense DSM 11586 G473DRAFT_scaffold00005.5_C, whole genome shotgun sequence 407,223
NZ_AUCG01000022.1 Niveispirillum irakense DSM 11586 G473DRAFT_scaffold00006.6_C, whole genome shotgun sequence 397,993
NZ_AUCG01000023.1 Niveispirillum irakense DSM 11586 G473DRAFT_scaffold00007.7_C, whole genome shotgun sequence 389,736
NZ_KE386933.1 Niveispirillum irakense DSM 11586 G473DRAFT_scaffold00001.1, whole genome shotgun sequence 1,048,947
NZ_KE386934.1 Niveispirillum irakense DSM 11586 G473DRAFT_scaffold00003.3, whole genome shotgun sequence 677,837
NZ_KE386935.1 Niveispirillum irakense DSM 11586 G473DRAFT_scaffold00008.8, whole genome shotgun sequence 291,808
NZ_KE386936.1 Niveispirillum irakense DSM 11586 G473DRAFT_scaffold00009.9, whole genome shotgun sequence 225,753
NZ_KE386937.1 Niveispirillum irakense DSM 11586 G473DRAFT_scaffold00018.18, whole genome shotgun sequence 29,562

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory