fast.genomicscompare 6,575 genera of bacteria & archaea

 

Micropelagos thuwalensis RS24

Genome identifier: GCF_000469155.1

NCBI assembly name: RS24

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Parvibaculales, RS24, Micropelagos, Micropelagos thuwalensis

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Candidatus Micropelagos, Candidatus Micropelagos thuwalensis

Scaffolds: 5

Genes: 1,929 Protein-coding: 1,874 RNAs: 43 pseudogenes: 12

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_AWXE01000001.1 Candidatus Micropelagos thuwalensis strain RS24 Contig1, whole genome shotgun sequence 736,154
NZ_AWXE01000002.1 Candidatus Micropelagos thuwalensis strain RS24 Contig2, whole genome shotgun sequence 25,260
NZ_AWXE01000003.1 Candidatus Micropelagos thuwalensis strain RS24 Contig3, whole genome shotgun sequence 170,269
NZ_AWXE01000004.1 Candidatus Micropelagos thuwalensis strain RS24 Contig4, whole genome shotgun sequence 881,923
NZ_AWXE01000005.1 Candidatus Micropelagos thuwalensis strain RS24 Contig5, whole genome shotgun sequence 144,118

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory