fast.genomicscompare 6,575 genera of bacteria & archaea

 

ATBO01 sp000472285 TF

Genome identifier: GCF_000472285.1

NCBI assembly name: ASM47228v1

GTDB taxonomy: Bacteria, Desulfobacterota, Desulfuromonadia, Desulfuromonadales, ATBO01, ATBO01, ATBO01 sp000472285

NCBI taxonomy: Bacteria, Thermodesulfobacteriota, Desulfuromonadia, Desulfuromonadales, Desulfuromonadaceae, Desulfuromonas

Scaffolds: 17

Genes: 4,107 Protein-coding: 4,026 RNAs: 48 pseudogenes: 33

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_KI421412.1 Desulfuromonas sp. TF TF_13336, whole genome shotgun sequence 527,977
NZ_KI421413.1 Desulfuromonas sp. TF TF_13619, whole genome shotgun sequence 547,432
NZ_KI421414.1 Desulfuromonas sp. TF TF_13669, whole genome shotgun sequence 145,512
NZ_KI421415.1 Desulfuromonas sp. TF TF_13717, whole genome shotgun sequence 216,944
NZ_KI421416.1 Desulfuromonas sp. TF TF_14253, whole genome shotgun sequence 176,948
NZ_KI421417.1 Desulfuromonas sp. TF TF_18586, whole genome shotgun sequence 104,097
NZ_KI421418.1 Desulfuromonas sp. TF TF_22004, whole genome shotgun sequence 394,359
NZ_KI421419.1 Desulfuromonas sp. TF TF_226, whole genome shotgun sequence 118,212
NZ_KI421420.1 Desulfuromonas sp. TF TF_26370, whole genome shotgun sequence 125,827
NZ_KI421421.1 Desulfuromonas sp. TF TF_29222, whole genome shotgun sequence 753,181
NZ_KI421422.1 Desulfuromonas sp. TF TF_30261, whole genome shotgun sequence 190,844
NZ_KI421423.1 Desulfuromonas sp. TF TF_31646, whole genome shotgun sequence 104,319
NZ_KI421424.1 Desulfuromonas sp. TF TF_37051, whole genome shotgun sequence 302,018
NZ_KI421425.1 Desulfuromonas sp. TF TF_38465, whole genome shotgun sequence 88,580
NZ_KI421426.1 Desulfuromonas sp. TF TF_40281, whole genome shotgun sequence 249,368
NZ_KI421427.1 Desulfuromonas sp. TF TF_415, whole genome shotgun sequence 61,189
NZ_KI421428.1 Desulfuromonas sp. TF TF_848, whole genome shotgun sequence 295,946

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory