fast.genomicscompare 6,575 genera of bacteria & archaea

 

Lutibaculum baratangense AMV1

Genome identifier: GCF_000496075.1

NCBI assembly name: LuBa1.0

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Tepidamorphaceae, Lutibaculum, Lutibaculum baratangense

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Tepidamorphaceae, Lutibaculum, Lutibaculum baratangense

Scaffolds: 44

Genes: 4,135 Protein-coding: 4,023 RNAs: 58 pseudogenes: 54

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_AWXZ01000001.1 Lutibaculum baratangense AMV1 contig00039, whole genome shotgun sequence 4,558
NZ_AWXZ01000002.1 Lutibaculum baratangense AMV1 contig00026, whole genome shotgun sequence 23,420
NZ_AWXZ01000003.1 Lutibaculum baratangense AMV1 contig00029, whole genome shotgun sequence 15,510
NZ_AWXZ01000004.1 Lutibaculum baratangense AMV1 contig00022, whole genome shotgun sequence 37,849
NZ_AWXZ01000005.1 Lutibaculum baratangense AMV1 contig00020, whole genome shotgun sequence 53,030
NZ_AWXZ01000006.1 Lutibaculum baratangense AMV1 contig00032, whole genome shotgun sequence 11,538
NZ_AWXZ01000007.1 Lutibaculum baratangense AMV1 contig00007, whole genome shotgun sequence 224,142
NZ_AWXZ01000008.1 Lutibaculum baratangense AMV1 contig00038, whole genome shotgun sequence 4,997
NZ_AWXZ01000009.1 Lutibaculum baratangense AMV1 contig00036, whole genome shotgun sequence 6,894
NZ_AWXZ01000010.1 Lutibaculum baratangense AMV1 contig00041, whole genome shotgun sequence 1,328
NZ_AWXZ01000011.1 Lutibaculum baratangense AMV1 contig00027, whole genome shotgun sequence 19,391
NZ_AWXZ01000012.1 Lutibaculum baratangense AMV1 contig00018, whole genome shotgun sequence 100,984
NZ_AWXZ01000013.1 Lutibaculum baratangense AMV1 contig00004, whole genome shotgun sequence 260,644
NZ_AWXZ01000014.1 Lutibaculum baratangense AMV1 contig00017, whole genome shotgun sequence 101,532
NZ_AWXZ01000015.1 Lutibaculum baratangense AMV1 contig00009, whole genome shotgun sequence 159,545
NZ_AWXZ01000016.1 Lutibaculum baratangense AMV1 contig00010, whole genome shotgun sequence 154,325
NZ_AWXZ01000017.1 Lutibaculum baratangense AMV1 contig00003, whole genome shotgun sequence 315,233
NZ_AWXZ01000018.1 Lutibaculum baratangense AMV1 contig00011, whole genome shotgun sequence 150,497
NZ_AWXZ01000019.1 Lutibaculum baratangense AMV1 contig00012, whole genome shotgun sequence 132,950
NZ_AWXZ01000020.1 Lutibaculum baratangense AMV1 contig00024, whole genome shotgun sequence 34,160
NZ_AWXZ01000021.1 Lutibaculum baratangense AMV1 contig00042, whole genome shotgun sequence 1,268
NZ_AWXZ01000022.1 Lutibaculum baratangense AMV1 contig00040, whole genome shotgun sequence 1,386
NZ_AWXZ01000023.1 Lutibaculum baratangense AMV1 contig00014, whole genome shotgun sequence 122,530
NZ_AWXZ01000024.1 Lutibaculum baratangense AMV1 contig00028, whole genome shotgun sequence 17,611
NZ_AWXZ01000025.1 Lutibaculum baratangense AMV1 contig00030, whole genome shotgun sequence 15,385
NZ_AWXZ01000026.1 Lutibaculum baratangense AMV1 contig00016, whole genome shotgun sequence 111,239
NZ_AWXZ01000027.1 Lutibaculum baratangense AMV1 contig00037, whole genome shotgun sequence 5,506
NZ_AWXZ01000028.1 Lutibaculum baratangense AMV1 contig00031, whole genome shotgun sequence 12,890
NZ_AWXZ01000029.1 Lutibaculum baratangense AMV1 contig00006, whole genome shotgun sequence 224,804
NZ_AWXZ01000030.1 Lutibaculum baratangense AMV1 contig00025, whole genome shotgun sequence 33,623
NZ_AWXZ01000031.1 Lutibaculum baratangense AMV1 contig00013, whole genome shotgun sequence 125,177
NZ_AWXZ01000032.1 Lutibaculum baratangense AMV1 contig00034, whole genome shotgun sequence 8,689
NZ_AWXZ01000033.1 Lutibaculum baratangense AMV1 contig00043, whole genome shotgun sequence 1,177
NZ_AWXZ01000034.1 Lutibaculum baratangense AMV1 contig00033, whole genome shotgun sequence 9,241
NZ_AWXZ01000035.1 Lutibaculum baratangense AMV1 contig00005, whole genome shotgun sequence 251,470
NZ_AWXZ01000036.1 Lutibaculum baratangense AMV1 contig00023, whole genome shotgun sequence 37,726
NZ_AWXZ01000037.1 Lutibaculum baratangense AMV1 contig00015, whole genome shotgun sequence 120,777
NZ_AWXZ01000038.1 Lutibaculum baratangense AMV1 contig00008, whole genome shotgun sequence 181,787
NZ_AWXZ01000039.1 Lutibaculum baratangense AMV1 contig00001, whole genome shotgun sequence 670,712
NZ_AWXZ01000040.1 Lutibaculum baratangense AMV1 contig00002, whole genome shotgun sequence 388,673
NZ_AWXZ01000041.1 Lutibaculum baratangense AMV1 contig00044, whole genome shotgun sequence 1,167
NZ_AWXZ01000042.1 Lutibaculum baratangense AMV1 contig00021, whole genome shotgun sequence 47,198
NZ_AWXZ01000043.1 Lutibaculum baratangense AMV1 contig00035, whole genome shotgun sequence 6,905
NZ_AWXZ01000044.1 Lutibaculum baratangense AMV1 contig00019, whole genome shotgun sequence 91,308

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory