fast.genomicscompare 6,575 genera of bacteria & archaea

 

Sphingomonas_D sanxanigenens NX02

Genome identifier: GCF_000512205.2

NCBI assembly name: ASM51220v2

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sphingomonadales, Sphingomonadaceae, Sphingomonas_D, Sphingomonas_D sanxanigenens

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sphingomonadales, Sphingomonadaceae, Sphingomonas, Sphingomonas sanxanigenens

Scaffolds: 2

Genes: 6,255 Protein-coding: 6,091 RNAs: 69 pseudogenes: 95

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_CP006644.1 Sphingomonas sanxanigenens DSM 19645 = NX02 chromosome, complete genome 6,205,897
NZ_CP011450.1 Sphingomonas sanxanigenens DSM 19645 = NX02 plasmid pNXO2, complete sequence 374,401

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory