fast.genomicscompare 6,575 genera of bacteria & archaea

 

Halonatronum saccharophilum DSM 13868

Genome identifier: GCF_000517025.1

NCBI assembly name: ASM51702v1

GTDB taxonomy: Bacteria, Bacillota_F, Halanaerobiia, Halobacteroidales, Halobacteroidaceae, Halonatronum, Halonatronum saccharophilum

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Halanaerobiales, Halobacteroidaceae, Halonatronum, Halonatronum saccharophilum

Scaffolds: 8

Genes: 2,796 Protein-coding: 2,677 RNAs: 84 pseudogenes: 35

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_AZYG01000001.1 Halonatronum saccharophilum DSM 13868 HalsacDRAFT_HSE.1_C, whole genome shotgun sequence 17,973
NZ_KI912091.1 Halonatronum saccharophilum DSM 13868 HalsacDRAFT_HSE.2, whole genome shotgun sequence 376,348
NZ_KI912092.1 Halonatronum saccharophilum DSM 13868 HalsacDRAFT_HSE.3, whole genome shotgun sequence 241,777
NZ_KI912093.1 Halonatronum saccharophilum DSM 13868 HalsacDRAFT_HSE.4, whole genome shotgun sequence 31,751
NZ_KI912094.1 Halonatronum saccharophilum DSM 13868 HalsacDRAFT_HSE.5, whole genome shotgun sequence 720,290
NZ_KI912095.1 Halonatronum saccharophilum DSM 13868 HalsacDRAFT_HSE.6, whole genome shotgun sequence 614,558
NZ_KI912096.1 Halonatronum saccharophilum DSM 13868 HalsacDRAFT_HSE.7, whole genome shotgun sequence 202,011
NZ_KI912097.1 Halonatronum saccharophilum DSM 13868 HalsacDRAFT_HSE.8, whole genome shotgun sequence 679,813

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory