fast.genomicscompare 6,575 genera of bacteria & archaea

 

Alkaliflexus imshenetskii Z-7010

Genome identifier: GCF_000517065.1

NCBI assembly name: ASM51706v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Bacteroidales, Marinilabiliaceae, Alkaliflexus, Alkaliflexus imshenetskii

NCBI taxonomy: Bacteria, Bacteroidota, Bacteroidia, Marinilabiliales, Marinilabiliaceae, Alkaliflexus, Alkaliflexus imshenetskii

Scaffolds: 5

Genes: 3,257 Protein-coding: 3,190 RNAs: 54 pseudogenes: 13

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_AJUM01000003.1 Alkaliflexus imshenetskii DSM 15055 strain Z-7010, DSM 15055 AlkimDRAFT_AIB.2_C, whole genome shotgun sequence 3,111
NZ_AJUM01000004.1 Alkaliflexus imshenetskii DSM 15055 strain Z-7010, DSM 15055 AlkimDRAFT_AIB.3_C, whole genome shotgun sequence 3,265
NZ_AJUM01000005.1 Alkaliflexus imshenetskii DSM 15055 strain Z-7010, DSM 15055 AlkimDRAFT_AIB.4_C, whole genome shotgun sequence 2,231
NZ_KI912104.1 Alkaliflexus imshenetskii DSM 15055 strain Z-7010, DSM 15055 AlkimDRAFT_AIB.1, whole genome shotgun sequence 4,943
NZ_KI912105.1 Alkaliflexus imshenetskii DSM 15055 strain Z-7010, DSM 15055 AlkimDRAFT_AIB.5, whole genome shotgun sequence 4,108,720

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory