fast.genomicscompare 6,575 genera of bacteria & archaea

 

Saccharicrinis fermentans DSM 9555

Genome identifier: GCF_000517085.1

NCBI assembly name: ASM51708v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Bacteroidales, Marinilabiliaceae, Saccharicrinis, Saccharicrinis fermentans

NCBI taxonomy: Bacteria, Bacteroidota, Bacteroidia, Marinilabiliales, Marinilabiliaceae, Saccharicrinis, Saccharicrinis fermentans

Scaffolds: 4

Genes: 4,647 Protein-coding: 4,508 RNAs: 71 pseudogenes: 68

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_AZYH01000001.1 Saccharicrinis fermentans DSM 9555 = JCM 21142 strain DSM 9555 CytfeDRAFT_CFC.1_C, whole genome shotgun sequence 2,202
NZ_KI912106.1 Saccharicrinis fermentans DSM 9555 = JCM 21142 strain DSM 9555 CytfeDRAFT_CFC.2, whole genome shotgun sequence 2,790
NZ_KI912107.1 Saccharicrinis fermentans DSM 9555 = JCM 21142 strain DSM 9555 CytfeDRAFT_CFC.3, whole genome shotgun sequence 5,926,711
NZ_KI912108.1 Saccharicrinis fermentans DSM 9555 = JCM 21142 strain DSM 9555 CytfeDRAFT_CFC.4, whole genome shotgun sequence 50,358

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory