fast.genomicscompare 6,575 genera of bacteria & archaea

 

Roseivivax halodurans JCM 10272

Genome identifier: GCF_000521785.1

NCBI assembly name: SOAPdenovo v1.05

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Roseivivax, Roseivivax halodurans

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Roseobacteraceae, Roseivivax, Roseivivax halodurans

Scaffolds: 150

Genes: 4,411 Protein-coding: 4,225 RNAs: 84 pseudogenes: 102

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JALZ01000001.1 Roseivivax halodurans JCM 10272 contig1, whole genome shotgun sequence 506,576
NZ_JALZ01000002.1 Roseivivax halodurans JCM 10272 contig2, whole genome shotgun sequence 323,970
NZ_JALZ01000003.1 Roseivivax halodurans JCM 10272 contig3, whole genome shotgun sequence 249,479
NZ_JALZ01000004.1 Roseivivax halodurans JCM 10272 contig4, whole genome shotgun sequence 228,014
NZ_JALZ01000005.1 Roseivivax halodurans JCM 10272 contig5, whole genome shotgun sequence 222,375
NZ_JALZ01000006.1 Roseivivax halodurans JCM 10272 contig6, whole genome shotgun sequence 197,198
NZ_JALZ01000007.1 Roseivivax halodurans JCM 10272 contig7, whole genome shotgun sequence 190,506
NZ_JALZ01000008.1 Roseivivax halodurans JCM 10272 contig8, whole genome shotgun sequence 189,519
NZ_JALZ01000009.1 Roseivivax halodurans JCM 10272 contig9, whole genome shotgun sequence 144,129
NZ_JALZ01000010.1 Roseivivax halodurans JCM 10272 contig10, whole genome shotgun sequence 144,013
NZ_JALZ01000011.1 Roseivivax halodurans JCM 10272 contig11, whole genome shotgun sequence 116,964
NZ_JALZ01000012.1 Roseivivax halodurans JCM 10272 contig12, whole genome shotgun sequence 108,276
NZ_JALZ01000013.1 Roseivivax halodurans JCM 10272 contig13, whole genome shotgun sequence 100,441
NZ_JALZ01000014.1 Roseivivax halodurans JCM 10272 contig14, whole genome shotgun sequence 97,056
NZ_JALZ01000015.1 Roseivivax halodurans JCM 10272 contig15, whole genome shotgun sequence 88,736
NZ_JALZ01000016.1 Roseivivax halodurans JCM 10272 contig16, whole genome shotgun sequence 76,087
NZ_JALZ01000017.1 Roseivivax halodurans JCM 10272 contig17, whole genome shotgun sequence 73,099
NZ_JALZ01000018.1 Roseivivax halodurans JCM 10272 contig18, whole genome shotgun sequence 58,140
NZ_JALZ01000019.1 Roseivivax halodurans JCM 10272 contig19, whole genome shotgun sequence 46,715
NZ_JALZ01000020.1 Roseivivax halodurans JCM 10272 contig20, whole genome shotgun sequence 45,411
NZ_JALZ01000021.1 Roseivivax halodurans JCM 10272 contig21, whole genome shotgun sequence 43,094
NZ_JALZ01000022.1 Roseivivax halodurans JCM 10272 contig22, whole genome shotgun sequence 42,125
NZ_JALZ01000023.1 Roseivivax halodurans JCM 10272 contig23, whole genome shotgun sequence 42,041
NZ_JALZ01000024.1 Roseivivax halodurans JCM 10272 contig24, whole genome shotgun sequence 38,977
NZ_JALZ01000025.1 Roseivivax halodurans JCM 10272 contig25, whole genome shotgun sequence 38,609
NZ_JALZ01000026.1 Roseivivax halodurans JCM 10272 contig26, whole genome shotgun sequence 36,673
NZ_JALZ01000027.1 Roseivivax halodurans JCM 10272 contig27, whole genome shotgun sequence 36,426
NZ_JALZ01000028.1 Roseivivax halodurans JCM 10272 contig28, whole genome shotgun sequence 35,553
NZ_JALZ01000029.1 Roseivivax halodurans JCM 10272 contig29, whole genome shotgun sequence 35,467
NZ_JALZ01000030.1 Roseivivax halodurans JCM 10272 contig30, whole genome shotgun sequence 34,811
NZ_JALZ01000031.1 Roseivivax halodurans JCM 10272 contig31, whole genome shotgun sequence 34,774
NZ_JALZ01000032.1 Roseivivax halodurans JCM 10272 contig32, whole genome shotgun sequence 32,729
NZ_JALZ01000033.1 Roseivivax halodurans JCM 10272 contig33, whole genome shotgun sequence 31,933
NZ_JALZ01000034.1 Roseivivax halodurans JCM 10272 contig34, whole genome shotgun sequence 31,493
NZ_JALZ01000035.1 Roseivivax halodurans JCM 10272 contig35, whole genome shotgun sequence 30,459
NZ_JALZ01000036.1 Roseivivax halodurans JCM 10272 contig36, whole genome shotgun sequence 29,822
NZ_JALZ01000037.1 Roseivivax halodurans JCM 10272 contig37, whole genome shotgun sequence 29,595
NZ_JALZ01000038.1 Roseivivax halodurans JCM 10272 contig38, whole genome shotgun sequence 25,850
NZ_JALZ01000039.1 Roseivivax halodurans JCM 10272 contig39, whole genome shotgun sequence 25,613
NZ_JALZ01000040.1 Roseivivax halodurans JCM 10272 contig40, whole genome shotgun sequence 24,703
NZ_JALZ01000041.1 Roseivivax halodurans JCM 10272 contig41, whole genome shotgun sequence 24,454
NZ_JALZ01000042.1 Roseivivax halodurans JCM 10272 contig42, whole genome shotgun sequence 24,175
NZ_JALZ01000043.1 Roseivivax halodurans JCM 10272 contig43, whole genome shotgun sequence 23,123
NZ_JALZ01000044.1 Roseivivax halodurans JCM 10272 contig44, whole genome shotgun sequence 22,862
NZ_JALZ01000045.1 Roseivivax halodurans JCM 10272 contig45, whole genome shotgun sequence 22,636
NZ_JALZ01000046.1 Roseivivax halodurans JCM 10272 contig46, whole genome shotgun sequence 22,383
NZ_JALZ01000047.1 Roseivivax halodurans JCM 10272 contig47, whole genome shotgun sequence 20,877
NZ_JALZ01000048.1 Roseivivax halodurans JCM 10272 contig48, whole genome shotgun sequence 18,766
NZ_JALZ01000049.1 Roseivivax halodurans JCM 10272 contig49, whole genome shotgun sequence 18,391
NZ_JALZ01000050.1 Roseivivax halodurans JCM 10272 contig50, whole genome shotgun sequence 16,574
NZ_JALZ01000051.1 Roseivivax halodurans JCM 10272 contig51, whole genome shotgun sequence 15,113
NZ_JALZ01000052.1 Roseivivax halodurans JCM 10272 contig52, whole genome shotgun sequence 13,955
NZ_JALZ01000053.1 Roseivivax halodurans JCM 10272 contig53, whole genome shotgun sequence 13,783
NZ_JALZ01000054.1 Roseivivax halodurans JCM 10272 contig54, whole genome shotgun sequence 13,580
NZ_JALZ01000055.1 Roseivivax halodurans JCM 10272 contig55, whole genome shotgun sequence 13,387
NZ_JALZ01000056.1 Roseivivax halodurans JCM 10272 contig56, whole genome shotgun sequence 12,597
NZ_JALZ01000057.1 Roseivivax halodurans JCM 10272 contig57, whole genome shotgun sequence 12,166
NZ_JALZ01000058.1 Roseivivax halodurans JCM 10272 contig58, whole genome shotgun sequence 12,008
NZ_JALZ01000059.1 Roseivivax halodurans JCM 10272 contig59, whole genome shotgun sequence 11,883
NZ_JALZ01000060.1 Roseivivax halodurans JCM 10272 contig60, whole genome shotgun sequence 11,411
NZ_JALZ01000061.1 Roseivivax halodurans JCM 10272 contig61, whole genome shotgun sequence 11,337
NZ_JALZ01000062.1 Roseivivax halodurans JCM 10272 contig62, whole genome shotgun sequence 11,094
NZ_JALZ01000063.1 Roseivivax halodurans JCM 10272 contig63, whole genome shotgun sequence 10,011
NZ_JALZ01000064.1 Roseivivax halodurans JCM 10272 contig64, whole genome shotgun sequence 9,311
NZ_JALZ01000065.1 Roseivivax halodurans JCM 10272 contig65, whole genome shotgun sequence 9,310
NZ_JALZ01000066.1 Roseivivax halodurans JCM 10272 contig66, whole genome shotgun sequence 9,025
NZ_JALZ01000067.1 Roseivivax halodurans JCM 10272 contig67, whole genome shotgun sequence 9,005
NZ_JALZ01000068.1 Roseivivax halodurans JCM 10272 contig68, whole genome shotgun sequence 8,714
NZ_JALZ01000069.1 Roseivivax halodurans JCM 10272 contig69, whole genome shotgun sequence 7,699
NZ_JALZ01000070.1 Roseivivax halodurans JCM 10272 contig70, whole genome shotgun sequence 7,699
NZ_JALZ01000071.1 Roseivivax halodurans JCM 10272 contig71, whole genome shotgun sequence 7,422
NZ_JALZ01000072.1 Roseivivax halodurans JCM 10272 contig72, whole genome shotgun sequence 7,380
NZ_JALZ01000073.1 Roseivivax halodurans JCM 10272 contig73, whole genome shotgun sequence 7,336
NZ_JALZ01000074.1 Roseivivax halodurans JCM 10272 contig74, whole genome shotgun sequence 7,219
NZ_JALZ01000075.1 Roseivivax halodurans JCM 10272 contig75, whole genome shotgun sequence 7,120
NZ_JALZ01000076.1 Roseivivax halodurans JCM 10272 contig76, whole genome shotgun sequence 7,025
NZ_JALZ01000077.1 Roseivivax halodurans JCM 10272 contig77, whole genome shotgun sequence 6,692
NZ_JALZ01000078.1 Roseivivax halodurans JCM 10272 contig78, whole genome shotgun sequence 5,561
NZ_JALZ01000079.1 Roseivivax halodurans JCM 10272 contig79, whole genome shotgun sequence 4,783
NZ_JALZ01000080.1 Roseivivax halodurans JCM 10272 contig80, whole genome shotgun sequence 4,587
NZ_JALZ01000081.1 Roseivivax halodurans JCM 10272 contig81, whole genome shotgun sequence 4,470
NZ_JALZ01000082.1 Roseivivax halodurans JCM 10272 contig82, whole genome shotgun sequence 3,776
NZ_JALZ01000083.1 Roseivivax halodurans JCM 10272 contig83, whole genome shotgun sequence 3,752
NZ_JALZ01000084.1 Roseivivax halodurans JCM 10272 contig84, whole genome shotgun sequence 3,660
NZ_JALZ01000085.1 Roseivivax halodurans JCM 10272 contig85, whole genome shotgun sequence 3,198
NZ_JALZ01000086.1 Roseivivax halodurans JCM 10272 contig86, whole genome shotgun sequence 3,177
NZ_JALZ01000087.1 Roseivivax halodurans JCM 10272 contig87, whole genome shotgun sequence 2,977
NZ_JALZ01000088.1 Roseivivax halodurans JCM 10272 contig88, whole genome shotgun sequence 2,928
NZ_JALZ01000089.1 Roseivivax halodurans JCM 10272 contig89, whole genome shotgun sequence 2,790
NZ_JALZ01000090.1 Roseivivax halodurans JCM 10272 contig90, whole genome shotgun sequence 2,767
NZ_JALZ01000091.1 Roseivivax halodurans JCM 10272 contig91, whole genome shotgun sequence 2,667
NZ_JALZ01000092.1 Roseivivax halodurans JCM 10272 contig92, whole genome shotgun sequence 2,584
NZ_JALZ01000093.1 Roseivivax halodurans JCM 10272 contig93, whole genome shotgun sequence 2,483
NZ_JALZ01000094.1 Roseivivax halodurans JCM 10272 contig94, whole genome shotgun sequence 2,386
NZ_JALZ01000095.1 Roseivivax halodurans JCM 10272 contig95, whole genome shotgun sequence 2,378
NZ_JALZ01000096.1 Roseivivax halodurans JCM 10272 contig96, whole genome shotgun sequence 2,374
NZ_JALZ01000097.1 Roseivivax halodurans JCM 10272 contig97, whole genome shotgun sequence 2,369
NZ_JALZ01000098.1 Roseivivax halodurans JCM 10272 contig98, whole genome shotgun sequence 2,212
NZ_JALZ01000099.1 Roseivivax halodurans JCM 10272 contig99, whole genome shotgun sequence 2,191
NZ_JALZ01000100.1 Roseivivax halodurans JCM 10272 contig100, whole genome shotgun sequence 1,995
NZ_JALZ01000101.1 Roseivivax halodurans JCM 10272 contig101, whole genome shotgun sequence 1,858
NZ_JALZ01000102.1 Roseivivax halodurans JCM 10272 contig102, whole genome shotgun sequence 1,842
NZ_JALZ01000103.1 Roseivivax halodurans JCM 10272 contig103, whole genome shotgun sequence 1,767
NZ_JALZ01000104.1 Roseivivax halodurans JCM 10272 contig104, whole genome shotgun sequence 1,754
NZ_JALZ01000105.1 Roseivivax halodurans JCM 10272 contig105, whole genome shotgun sequence 1,660
NZ_JALZ01000106.1 Roseivivax halodurans JCM 10272 contig106, whole genome shotgun sequence 1,639
NZ_JALZ01000107.1 Roseivivax halodurans JCM 10272 contig107, whole genome shotgun sequence 1,604
NZ_JALZ01000108.1 Roseivivax halodurans JCM 10272 contig108, whole genome shotgun sequence 1,596
NZ_JALZ01000109.1 Roseivivax halodurans JCM 10272 contig109, whole genome shotgun sequence 1,450
NZ_JALZ01000110.1 Roseivivax halodurans JCM 10272 contig110, whole genome shotgun sequence 1,436
NZ_JALZ01000111.1 Roseivivax halodurans JCM 10272 contig111, whole genome shotgun sequence 1,413
NZ_JALZ01000112.1 Roseivivax halodurans JCM 10272 contig112, whole genome shotgun sequence 1,379
NZ_JALZ01000113.1 Roseivivax halodurans JCM 10272 contig113, whole genome shotgun sequence 1,238
NZ_JALZ01000114.1 Roseivivax halodurans JCM 10272 contig114, whole genome shotgun sequence 1,223
NZ_JALZ01000115.1 Roseivivax halodurans JCM 10272 contig115, whole genome shotgun sequence 1,205
NZ_JALZ01000116.1 Roseivivax halodurans JCM 10272 contig116, whole genome shotgun sequence 1,188
NZ_JALZ01000117.1 Roseivivax halodurans JCM 10272 contig117, whole genome shotgun sequence 1,141
NZ_JALZ01000118.1 Roseivivax halodurans JCM 10272 contig118, whole genome shotgun sequence 1,130
NZ_JALZ01000119.1 Roseivivax halodurans JCM 10272 contig119, whole genome shotgun sequence 1,056
NZ_JALZ01000120.1 Roseivivax halodurans JCM 10272 contig120, whole genome shotgun sequence 1,030
NZ_JALZ01000121.1 Roseivivax halodurans JCM 10272 contig121, whole genome shotgun sequence 1,004
NZ_JALZ01000122.1 Roseivivax halodurans JCM 10272 contig122, whole genome shotgun sequence 991
NZ_JALZ01000123.1 Roseivivax halodurans JCM 10272 contig123, whole genome shotgun sequence 877
NZ_JALZ01000124.1 Roseivivax halodurans JCM 10272 contig124, whole genome shotgun sequence 853
NZ_JALZ01000125.1 Roseivivax halodurans JCM 10272 contig125, whole genome shotgun sequence 791
NZ_JALZ01000126.1 Roseivivax halodurans JCM 10272 contig126, whole genome shotgun sequence 763
NZ_JALZ01000127.1 Roseivivax halodurans JCM 10272 contig127, whole genome shotgun sequence 732
NZ_JALZ01000128.1 Roseivivax halodurans JCM 10272 contig128, whole genome shotgun sequence 725
NZ_JALZ01000129.1 Roseivivax halodurans JCM 10272 contig129, whole genome shotgun sequence 690
NZ_JALZ01000130.1 Roseivivax halodurans JCM 10272 contig130, whole genome shotgun sequence 663
NZ_JALZ01000131.1 Roseivivax halodurans JCM 10272 contig131, whole genome shotgun sequence 649
NZ_JALZ01000132.1 Roseivivax halodurans JCM 10272 contig132, whole genome shotgun sequence 641
NZ_JALZ01000133.1 Roseivivax halodurans JCM 10272 contig133, whole genome shotgun sequence 635
NZ_JALZ01000134.1 Roseivivax halodurans JCM 10272 contig134, whole genome shotgun sequence 595
NZ_JALZ01000135.1 Roseivivax halodurans JCM 10272 contig135, whole genome shotgun sequence 588
NZ_JALZ01000136.1 Roseivivax halodurans JCM 10272 contig136, whole genome shotgun sequence 482
NZ_JALZ01000137.1 Roseivivax halodurans JCM 10272 contig137, whole genome shotgun sequence 479
NZ_JALZ01000138.1 Roseivivax halodurans JCM 10272 contig138, whole genome shotgun sequence 457
NZ_JALZ01000139.1 Roseivivax halodurans JCM 10272 contig139, whole genome shotgun sequence 448
NZ_JALZ01000140.1 Roseivivax halodurans JCM 10272 contig140, whole genome shotgun sequence 443
NZ_JALZ01000141.1 Roseivivax halodurans JCM 10272 contig141, whole genome shotgun sequence 443
NZ_JALZ01000142.1 Roseivivax halodurans JCM 10272 contig142, whole genome shotgun sequence 390
NZ_JALZ01000143.1 Roseivivax halodurans JCM 10272 contig143, whole genome shotgun sequence 390
NZ_JALZ01000144.1 Roseivivax halodurans JCM 10272 contig144, whole genome shotgun sequence 374
NZ_JALZ01000145.1 Roseivivax halodurans JCM 10272 contig145, whole genome shotgun sequence 363
NZ_JALZ01000146.1 Roseivivax halodurans JCM 10272 contig146, whole genome shotgun sequence 361
NZ_JALZ01000147.1 Roseivivax halodurans JCM 10272 contig147, whole genome shotgun sequence 358
NZ_JALZ01000148.1 Roseivivax halodurans JCM 10272 contig148, whole genome shotgun sequence 355
NZ_JALZ01000149.1 Roseivivax halodurans JCM 10272 contig149, whole genome shotgun sequence 317
NZ_JALZ01000150.1 Roseivivax halodurans JCM 10272 contig150, whole genome shotgun sequence 305

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory