fast.genomicscompare 6,575 genera of bacteria & archaea

 

Deferrisoma camini S3R1

Genome identifier: GCF_000526155.1

NCBI assembly name: ASM52615v1

GTDB taxonomy: Bacteria, Desulfobacterota_C, Deferrisomatia, Deferrisomatales, Deferrisomataceae, Deferrisoma, Deferrisoma camini

NCBI taxonomy: Bacteria, Thermodesulfobacteriota, Deferrisomatia, Deferrisomatales, Deferrisomataceae, Deferrisoma, Deferrisoma camini

Scaffolds: 1

Genes: 3,754 Protein-coding: 3,678 RNAs: 59 pseudogenes: 17

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAFN01000001.1 Deferrisoma camini S3R1 DefcaDRAFT_chromosome1.1_C, whole genome shotgun sequence 4,236,551

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory