fast.genomicscompare 6,575 genera of bacteria & archaea

 

Aminiphilus circumscriptus DSM 16581

Genome identifier: GCF_000526375.1

NCBI assembly name: ASM52637v1

GTDB taxonomy: Bacteria, Synergistota, Synergistia, Synergistales, Aminiphilaceae, Aminiphilus, Aminiphilus circumscriptus

NCBI taxonomy: Bacteria, Synergistota, Synergistia, Synergistales, Aminiphilaceae, Aminiphilus, Aminiphilus circumscriptus

Scaffolds: 7

Genes: 2,820 Protein-coding: 2,699 RNAs: 66 pseudogenes: 55

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAFY01000001.1 Aminiphilus circumscriptus DSM 16581 K349DRAFT_scf7180000000019_quiver.1_C, whole genome shotgun sequence 141,303
NZ_JAFY01000002.1 Aminiphilus circumscriptus DSM 16581 K349DRAFT_scf7180000000017_quiver.2_C, whole genome shotgun sequence 1,358,858
NZ_JAFY01000003.1 Aminiphilus circumscriptus DSM 16581 K349DRAFT_scf7180000000020_quiver.3_C, whole genome shotgun sequence 9,967
NZ_JAFY01000004.1 Aminiphilus circumscriptus DSM 16581 K349DRAFT_scf7180000000021_quiver.4_C, whole genome shotgun sequence 4,448
NZ_JAFY01000005.1 Aminiphilus circumscriptus DSM 16581 K349DRAFT_scf7180000000016_quiver.5_C, whole genome shotgun sequence 678,472
NZ_JAFY01000006.1 Aminiphilus circumscriptus DSM 16581 K349DRAFT_scf7180000000022_quiver.6_C, whole genome shotgun sequence 6,981
NZ_JAFY01000007.1 Aminiphilus circumscriptus DSM 16581 K349DRAFT_scf7180000000018_quiver.7_C, whole genome shotgun sequence 1,023,183

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory