fast.genomicscompare 6,575 genera of bacteria & archaea

 

Alkanindiges illinoisensis DSM 15370

Genome identifier: GCF_000619845.1

NCBI assembly name: ASM61984v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Pseudomonadales, Moraxellaceae, Alkanindiges, Alkanindiges illinoisensis

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Moraxellales, Moraxellaceae, Alkanindiges, Alkanindiges illinoisensis

Scaffolds: 11

Genes: 3,102 Protein-coding: 2,995 RNAs: 54 pseudogenes: 53

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JHUX01000001.1 Alkanindiges illinoisensis DSM 15370 Q337DRAFT_scaffold00010.10_C, whole genome shotgun sequence 3,884
NZ_JHUX01000002.1 Alkanindiges illinoisensis DSM 15370 Q337DRAFT_scaffold00011.11_C, whole genome shotgun sequence 1,162
NZ_JHUX01000003.1 Alkanindiges illinoisensis DSM 15370 Q337DRAFT_scaffold00001.1_C, whole genome shotgun sequence 1,780,621
NZ_JHUX01000004.1 Alkanindiges illinoisensis DSM 15370 Q337DRAFT_scaffold00002.2_C, whole genome shotgun sequence 471,815
NZ_JHUX01000007.1 Alkanindiges illinoisensis DSM 15370 Q337DRAFT_scaffold00004.4_C, whole genome shotgun sequence 186,561
NZ_JHUX01000008.1 Alkanindiges illinoisensis DSM 15370 Q337DRAFT_scaffold00005.5_C, whole genome shotgun sequence 176,565
NZ_JHUX01000009.1 Alkanindiges illinoisensis DSM 15370 Q337DRAFT_scaffold00006.6_C, whole genome shotgun sequence 107,018
NZ_JHUX01000010.1 Alkanindiges illinoisensis DSM 15370 Q337DRAFT_scaffold00007.7_C, whole genome shotgun sequence 84,291
NZ_JHUX01000011.1 Alkanindiges illinoisensis DSM 15370 Q337DRAFT_scaffold00008.8_C, whole genome shotgun sequence 51,156
NZ_JHUX01000012.1 Alkanindiges illinoisensis DSM 15370 Q337DRAFT_scaffold00009.9_C, whole genome shotgun sequence 38,395
NZ_KK211037.1 Alkanindiges illinoisensis DSM 15370 Q337DRAFT_scaffold00003.3, whole genome shotgun sequence 397,940

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory