fast.genomicscompare 6,575 genera of bacteria & archaea

 

Balneatrix alpica DSM 16621

Genome identifier: GCF_000619885.1

NCBI assembly name: ASM61988v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Pseudomonadales, Nitrincolaceae, Balneatrix, Balneatrix alpica

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Oceanospirillales, Balneatrichaceae, Balneatrix, Balneatrix alpica

Scaffolds: 14

Genes: 3,439 Protein-coding: 3,353 RNAs: 76 pseudogenes: 10

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JHUZ01000001.1 Balneatrix alpica DSM 16621 Q334DRAFT_scaffold00010.10_C, whole genome shotgun sequence 57,258
NZ_JHUZ01000002.1 Balneatrix alpica DSM 16621 Q334DRAFT_scaffold00011.11_C, whole genome shotgun sequence 16,188
NZ_JHUZ01000003.1 Balneatrix alpica DSM 16621 Q334DRAFT_scaffold00012.12_C, whole genome shotgun sequence 15,873
NZ_JHUZ01000004.1 Balneatrix alpica DSM 16621 Q334DRAFT_scaffold00013.13_C, whole genome shotgun sequence 3,404
NZ_JHUZ01000005.1 Balneatrix alpica DSM 16621 Q334DRAFT_scaffold00014.14_C, whole genome shotgun sequence 1,265
NZ_JHUZ01000006.1 Balneatrix alpica DSM 16621 Q334DRAFT_scaffold00001.1_C, whole genome shotgun sequence 749,050
NZ_JHUZ01000011.1 Balneatrix alpica DSM 16621 Q334DRAFT_scaffold00004.4_C, whole genome shotgun sequence 556,771
NZ_JHUZ01000014.1 Balneatrix alpica DSM 16621 Q334DRAFT_scaffold00006.6_C, whole genome shotgun sequence 211,751
NZ_JHUZ01000015.1 Balneatrix alpica DSM 16621 Q334DRAFT_scaffold00007.7_C, whole genome shotgun sequence 178,748
NZ_JHUZ01000016.1 Balneatrix alpica DSM 16621 Q334DRAFT_scaffold00008.8_C, whole genome shotgun sequence 110,770
NZ_JHUZ01000017.1 Balneatrix alpica DSM 16621 Q334DRAFT_scaffold00009.9_C, whole genome shotgun sequence 85,754
NZ_KK211039.1 Balneatrix alpica DSM 16621 Q334DRAFT_scaffold00002.2, whole genome shotgun sequence 715,093
NZ_KK211040.1 Balneatrix alpica DSM 16621 Q334DRAFT_scaffold00003.3, whole genome shotgun sequence 561,094
NZ_KK211041.1 Balneatrix alpica DSM 16621 Q334DRAFT_scaffold00005.5, whole genome shotgun sequence 390,899

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory