fast.genomicscompare 6,575 genera of bacteria & archaea

 

Marinobacterium_B jannaschii DSM 6295

Genome identifier: GCF_000620085.1

NCBI assembly name: ASM62008v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Pseudomonadales, Nitrincolaceae, Marinobacterium_B, Marinobacterium_B jannaschii

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Oceanospirillales, Oceanospirillaceae, Marinobacterium, Marinobacterium jannaschii

Scaffolds: 39

Genes: 4,706 Protein-coding: 4,600 RNAs: 74 pseudogenes: 32

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JHVJ01000003.1 Marinobacterium jannaschii DSM 6295 Q354DRAFT_scaffold00002.2_C, whole genome shotgun sequence 373,228
NZ_JHVJ01000004.1 Marinobacterium jannaschii DSM 6295 Q354DRAFT_scaffold00003.3_C, whole genome shotgun sequence 359,421
NZ_JHVJ01000005.1 Marinobacterium jannaschii DSM 6295 Q354DRAFT_scaffold00004.4_C, whole genome shotgun sequence 346,949
NZ_JHVJ01000006.1 Marinobacterium jannaschii DSM 6295 Q354DRAFT_scaffold00005.5_C, whole genome shotgun sequence 328,721
NZ_JHVJ01000007.1 Marinobacterium jannaschii DSM 6295 Q354DRAFT_scaffold00006.6_C, whole genome shotgun sequence 318,347
NZ_JHVJ01000010.1 Marinobacterium jannaschii DSM 6295 Q354DRAFT_scaffold00008.8_C, whole genome shotgun sequence 293,170
NZ_JHVJ01000017.1 Marinobacterium jannaschii DSM 6295 Q354DRAFT_scaffold00012.12_C, whole genome shotgun sequence 201,845
NZ_JHVJ01000018.1 Marinobacterium jannaschii DSM 6295 Q354DRAFT_scaffold00013.13_C, whole genome shotgun sequence 172,765
NZ_JHVJ01000019.1 Marinobacterium jannaschii DSM 6295 Q354DRAFT_scaffold00014.14_C, whole genome shotgun sequence 152,583
NZ_JHVJ01000022.1 Marinobacterium jannaschii DSM 6295 Q354DRAFT_scaffold00016.16_C, whole genome shotgun sequence 127,110
NZ_JHVJ01000025.1 Marinobacterium jannaschii DSM 6295 Q354DRAFT_scaffold00018.18_C, whole genome shotgun sequence 105,141
NZ_JHVJ01000026.1 Marinobacterium jannaschii DSM 6295 Q354DRAFT_scaffold00019.19_C, whole genome shotgun sequence 80,635
NZ_JHVJ01000027.1 Marinobacterium jannaschii DSM 6295 Q354DRAFT_scaffold00020.20_C, whole genome shotgun sequence 71,045
NZ_JHVJ01000030.1 Marinobacterium jannaschii DSM 6295 Q354DRAFT_scaffold00022.22_C, whole genome shotgun sequence 63,265
NZ_JHVJ01000031.1 Marinobacterium jannaschii DSM 6295 Q354DRAFT_scaffold00023.23_C, whole genome shotgun sequence 62,020
NZ_JHVJ01000032.1 Marinobacterium jannaschii DSM 6295 Q354DRAFT_scaffold00024.24_C, whole genome shotgun sequence 60,529
NZ_JHVJ01000033.1 Marinobacterium jannaschii DSM 6295 Q354DRAFT_scaffold00025.25_C, whole genome shotgun sequence 60,069
NZ_JHVJ01000034.1 Marinobacterium jannaschii DSM 6295 Q354DRAFT_scaffold00026.26_C, whole genome shotgun sequence 60,079
NZ_JHVJ01000035.1 Marinobacterium jannaschii DSM 6295 Q354DRAFT_scaffold00027.27_C, whole genome shotgun sequence 35,256
NZ_JHVJ01000036.1 Marinobacterium jannaschii DSM 6295 Q354DRAFT_scaffold00028.28_C, whole genome shotgun sequence 26,819
NZ_JHVJ01000037.1 Marinobacterium jannaschii DSM 6295 Q354DRAFT_scaffold00029.29_C, whole genome shotgun sequence 22,356
NZ_JHVJ01000038.1 Marinobacterium jannaschii DSM 6295 Q354DRAFT_scaffold00030.30_C, whole genome shotgun sequence 19,044
NZ_JHVJ01000039.1 Marinobacterium jannaschii DSM 6295 Q354DRAFT_scaffold00031.31_C, whole genome shotgun sequence 16,482
NZ_JHVJ01000040.1 Marinobacterium jannaschii DSM 6295 Q354DRAFT_scaffold00032.32_C, whole genome shotgun sequence 16,013
NZ_JHVJ01000041.1 Marinobacterium jannaschii DSM 6295 Q354DRAFT_scaffold00033.33_C, whole genome shotgun sequence 11,388
NZ_JHVJ01000042.1 Marinobacterium jannaschii DSM 6295 Q354DRAFT_scaffold00034.34_C, whole genome shotgun sequence 7,252
NZ_JHVJ01000043.1 Marinobacterium jannaschii DSM 6295 Q354DRAFT_scaffold00035.35_C, whole genome shotgun sequence 4,914
NZ_JHVJ01000044.1 Marinobacterium jannaschii DSM 6295 Q354DRAFT_scaffold00036.36_C, whole genome shotgun sequence 3,468
NZ_JHVJ01000045.1 Marinobacterium jannaschii DSM 6295 Q354DRAFT_scaffold00037.37_C, whole genome shotgun sequence 3,263
NZ_JHVJ01000046.1 Marinobacterium jannaschii DSM 6295 Q354DRAFT_scaffold00038.38_C, whole genome shotgun sequence 2,867
NZ_JHVJ01000047.1 Marinobacterium jannaschii DSM 6295 Q354DRAFT_scaffold00039.39_C, whole genome shotgun sequence 2,116
NZ_KK211064.1 Marinobacterium jannaschii DSM 6295 Q354DRAFT_scaffold00001.1, whole genome shotgun sequence 433,287
NZ_KK211065.1 Marinobacterium jannaschii DSM 6295 Q354DRAFT_scaffold00007.7, whole genome shotgun sequence 296,706
NZ_KK211066.1 Marinobacterium jannaschii DSM 6295 Q354DRAFT_scaffold00009.9, whole genome shotgun sequence 271,667
NZ_KK211067.1 Marinobacterium jannaschii DSM 6295 Q354DRAFT_scaffold00010.10, whole genome shotgun sequence 234,010
NZ_KK211068.1 Marinobacterium jannaschii DSM 6295 Q354DRAFT_scaffold00011.11, whole genome shotgun sequence 209,133
NZ_KK211069.1 Marinobacterium jannaschii DSM 6295 Q354DRAFT_scaffold00015.15, whole genome shotgun sequence 143,744
NZ_KK211070.1 Marinobacterium jannaschii DSM 6295 Q354DRAFT_scaffold00017.17, whole genome shotgun sequence 113,928
NZ_KK211071.1 Marinobacterium jannaschii DSM 6295 Q354DRAFT_scaffold00021.21, whole genome shotgun sequence 67,200

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory