Genome identifier: GCF_000621485.1
NCBI assembly name: ASM62148v1
GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Peptostreptococcales, Natronincolaceae, Alkaliphilus, Alkaliphilus transvaalensis
NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Clostridiaceae, Alkaliphilus, Alkaliphilus transvaalensis
Scaffolds: 44
Genes: 3,795 Protein-coding: 3,718 RNAs: 56 pseudogenes: 21
GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)
| scaffoldId | description | length |
|---|---|---|
| NZ_JHYF01000001.1 | Alkaliphilus transvaalensis ATCC 700919 T335DRAFT_scaffold00001.1_C, whole genome shotgun sequence | 481,068 |
| NZ_JHYF01000002.1 | Alkaliphilus transvaalensis ATCC 700919 T335DRAFT_scaffold00002.2_C, whole genome shotgun sequence | 446,976 |
| NZ_JHYF01000003.1 | Alkaliphilus transvaalensis ATCC 700919 T335DRAFT_scaffold00003.3_C, whole genome shotgun sequence | 346,588 |
| NZ_JHYF01000006.1 | Alkaliphilus transvaalensis ATCC 700919 T335DRAFT_scaffold00005.5_C, whole genome shotgun sequence | 314,517 |
| NZ_JHYF01000009.1 | Alkaliphilus transvaalensis ATCC 700919 T335DRAFT_scaffold00007.7_C, whole genome shotgun sequence | 262,265 |
| NZ_JHYF01000012.1 | Alkaliphilus transvaalensis ATCC 700919 T335DRAFT_scaffold00009.9_C, whole genome shotgun sequence | 191,320 |
| NZ_JHYF01000013.1 | Alkaliphilus transvaalensis ATCC 700919 T335DRAFT_scaffold00010.10_C, whole genome shotgun sequence | 171,452 |
| NZ_JHYF01000014.1 | Alkaliphilus transvaalensis ATCC 700919 T335DRAFT_scaffold00011.11_C, whole genome shotgun sequence | 167,561 |
| NZ_JHYF01000015.1 | Alkaliphilus transvaalensis ATCC 700919 T335DRAFT_scaffold00012.12_C, whole genome shotgun sequence | 159,942 |
| NZ_JHYF01000016.1 | Alkaliphilus transvaalensis ATCC 700919 T335DRAFT_scaffold00013.13_C, whole genome shotgun sequence | 130,578 |
| NZ_JHYF01000017.1 | Alkaliphilus transvaalensis ATCC 700919 T335DRAFT_scaffold00014.14_C, whole genome shotgun sequence | 130,363 |
| NZ_JHYF01000018.1 | Alkaliphilus transvaalensis ATCC 700919 T335DRAFT_scaffold00015.15_C, whole genome shotgun sequence | 63,792 |
| NZ_JHYF01000019.1 | Alkaliphilus transvaalensis ATCC 700919 T335DRAFT_scaffold00016.16_C, whole genome shotgun sequence | 56,377 |
| NZ_JHYF01000020.1 | Alkaliphilus transvaalensis ATCC 700919 T335DRAFT_scaffold00017.17_C, whole genome shotgun sequence | 45,001 |
| NZ_JHYF01000021.1 | Alkaliphilus transvaalensis ATCC 700919 T335DRAFT_scaffold00018.18_C, whole genome shotgun sequence | 40,523 |
| NZ_JHYF01000022.1 | Alkaliphilus transvaalensis ATCC 700919 T335DRAFT_scaffold00019.19_C, whole genome shotgun sequence | 20,714 |
| NZ_JHYF01000023.1 | Alkaliphilus transvaalensis ATCC 700919 T335DRAFT_scaffold00020.20_C, whole genome shotgun sequence | 19,878 |
| NZ_JHYF01000024.1 | Alkaliphilus transvaalensis ATCC 700919 T335DRAFT_scaffold00021.21_C, whole genome shotgun sequence | 18,630 |
| NZ_JHYF01000025.1 | Alkaliphilus transvaalensis ATCC 700919 T335DRAFT_scaffold00022.22_C, whole genome shotgun sequence | 16,246 |
| NZ_JHYF01000026.1 | Alkaliphilus transvaalensis ATCC 700919 T335DRAFT_scaffold00023.23_C, whole genome shotgun sequence | 15,714 |
| NZ_JHYF01000027.1 | Alkaliphilus transvaalensis ATCC 700919 T335DRAFT_scaffold00024.24_C, whole genome shotgun sequence | 11,173 |
| NZ_JHYF01000028.1 | Alkaliphilus transvaalensis ATCC 700919 T335DRAFT_scaffold00025.25_C, whole genome shotgun sequence | 10,005 |
| NZ_JHYF01000029.1 | Alkaliphilus transvaalensis ATCC 700919 T335DRAFT_scaffold00026.26_C, whole genome shotgun sequence | 9,808 |
| NZ_JHYF01000030.1 | Alkaliphilus transvaalensis ATCC 700919 T335DRAFT_scaffold00027.27_C, whole genome shotgun sequence | 7,100 |
| NZ_JHYF01000031.1 | Alkaliphilus transvaalensis ATCC 700919 T335DRAFT_scaffold00028.28_C, whole genome shotgun sequence | 2,840 |
| NZ_JHYF01000032.1 | Alkaliphilus transvaalensis ATCC 700919 T335DRAFT_scaffold00029.29_C, whole genome shotgun sequence | 2,993 |
| NZ_JHYF01000033.1 | Alkaliphilus transvaalensis ATCC 700919 T335DRAFT_scaffold00030.30_C, whole genome shotgun sequence | 2,403 |
| NZ_JHYF01000034.1 | Alkaliphilus transvaalensis ATCC 700919 T335DRAFT_scaffold00031.31_C, whole genome shotgun sequence | 1,760 |
| NZ_JHYF01000035.1 | Alkaliphilus transvaalensis ATCC 700919 T335DRAFT_scaffold00032.32_C, whole genome shotgun sequence | 1,725 |
| NZ_JHYF01000036.1 | Alkaliphilus transvaalensis ATCC 700919 T335DRAFT_scaffold00033.33_C, whole genome shotgun sequence | 1,466 |
| NZ_JHYF01000037.1 | Alkaliphilus transvaalensis ATCC 700919 T335DRAFT_scaffold00034.34_C, whole genome shotgun sequence | 1,452 |
| NZ_JHYF01000038.1 | Alkaliphilus transvaalensis ATCC 700919 T335DRAFT_scaffold00035.35_C, whole genome shotgun sequence | 1,439 |
| NZ_JHYF01000039.1 | Alkaliphilus transvaalensis ATCC 700919 T335DRAFT_scaffold00036.36_C, whole genome shotgun sequence | 1,387 |
| NZ_JHYF01000040.1 | Alkaliphilus transvaalensis ATCC 700919 T335DRAFT_scaffold00037.37_C, whole genome shotgun sequence | 1,382 |
| NZ_JHYF01000041.1 | Alkaliphilus transvaalensis ATCC 700919 T335DRAFT_scaffold00038.38_C, whole genome shotgun sequence | 1,339 |
| NZ_JHYF01000042.1 | Alkaliphilus transvaalensis ATCC 700919 T335DRAFT_scaffold00039.39_C, whole genome shotgun sequence | 1,262 |
| NZ_JHYF01000043.1 | Alkaliphilus transvaalensis ATCC 700919 T335DRAFT_scaffold00040.40_C, whole genome shotgun sequence | 1,243 |
| NZ_JHYF01000044.1 | Alkaliphilus transvaalensis ATCC 700919 T335DRAFT_scaffold00041.41_C, whole genome shotgun sequence | 1,067 |
| NZ_JHYF01000045.1 | Alkaliphilus transvaalensis ATCC 700919 T335DRAFT_scaffold00042.42_C, whole genome shotgun sequence | 1,059 |
| NZ_JHYF01000046.1 | Alkaliphilus transvaalensis ATCC 700919 T335DRAFT_scaffold00043.43_C, whole genome shotgun sequence | 1,050 |
| NZ_JHYF01000047.1 | Alkaliphilus transvaalensis ATCC 700919 T335DRAFT_scaffold00044.44_C, whole genome shotgun sequence | 1,009 |
| NZ_KK211286.1 | Alkaliphilus transvaalensis ATCC 700919 T335DRAFT_scaffold00004.4, whole genome shotgun sequence | 329,833 |
| NZ_KK211287.1 | Alkaliphilus transvaalensis ATCC 700919 T335DRAFT_scaffold00006.6, whole genome shotgun sequence | 279,476 |
| NZ_KK211288.1 | Alkaliphilus transvaalensis ATCC 700919 T335DRAFT_scaffold00008.8, whole genome shotgun sequence | 251,062 |