fast.genomicscompare 6,575 genera of bacteria & archaea

 

Actibacterium mucosum KCTC 23349

Genome identifier: GCF_000647975.1

NCBI assembly name: SOAPdenovo v1.05

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Actibacterium, Actibacterium mucosum

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Roseobacteraceae, Actibacterium, Actibacterium mucosum

Scaffolds: 22

Genes: 3,764 Protein-coding: 3,700 RNAs: 47 pseudogenes: 17

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JFKE01000001.1 Actibacterium mucosum KCTC 23349 contig1, whole genome shotgun sequence 679,914
NZ_JFKE01000002.1 Actibacterium mucosum KCTC 23349 contig2, whole genome shotgun sequence 629,651
NZ_JFKE01000003.1 Actibacterium mucosum KCTC 23349 contig3, whole genome shotgun sequence 548,243
NZ_JFKE01000004.1 Actibacterium mucosum KCTC 23349 contig4, whole genome shotgun sequence 536,952
NZ_JFKE01000005.1 Actibacterium mucosum KCTC 23349 contig5, whole genome shotgun sequence 409,937
NZ_JFKE01000006.1 Actibacterium mucosum KCTC 23349 contig6, whole genome shotgun sequence 222,387
NZ_JFKE01000007.1 Actibacterium mucosum KCTC 23349 contig7, whole genome shotgun sequence 184,958
NZ_JFKE01000008.1 Actibacterium mucosum KCTC 23349 contig8, whole genome shotgun sequence 110,630
NZ_JFKE01000009.1 Actibacterium mucosum KCTC 23349 contig9, whole genome shotgun sequence 98,131
NZ_JFKE01000010.1 Actibacterium mucosum KCTC 23349 contig10, whole genome shotgun sequence 97,999
NZ_JFKE01000011.1 Actibacterium mucosum KCTC 23349 contig11, whole genome shotgun sequence 87,656
NZ_JFKE01000012.1 Actibacterium mucosum KCTC 23349 contig12, whole genome shotgun sequence 28,861
NZ_JFKE01000013.1 Actibacterium mucosum KCTC 23349 contig13, whole genome shotgun sequence 27,639
NZ_JFKE01000014.1 Actibacterium mucosum KCTC 23349 contig14, whole genome shotgun sequence 23,659
NZ_JFKE01000015.1 Actibacterium mucosum KCTC 23349 contig15, whole genome shotgun sequence 12,000
NZ_JFKE01000016.1 Actibacterium mucosum KCTC 23349 contig16, whole genome shotgun sequence 5,546
NZ_JFKE01000017.1 Actibacterium mucosum KCTC 23349 contig17, whole genome shotgun sequence 3,446
NZ_JFKE01000018.1 Actibacterium mucosum KCTC 23349 contig18, whole genome shotgun sequence 1,946
NZ_JFKE01000019.1 Actibacterium mucosum KCTC 23349 contig19, whole genome shotgun sequence 1,805
NZ_JFKE01000020.1 Actibacterium mucosum KCTC 23349 contig20, whole genome shotgun sequence 1,536
NZ_JFKE01000021.1 Actibacterium mucosum KCTC 23349 contig21, whole genome shotgun sequence 1,283
NZ_JFKE01000022.1 Actibacterium mucosum KCTC 23349 contig22, whole genome shotgun sequence 1,158

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory