fast.genomicscompare 6,575 genera of bacteria & archaea

 

NK3A76 sp000686125 NK3A76

Genome identifier: GCF_000686125.1

NCBI assembly name: ASM68612v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Oscillospirales, Ruminococcaceae, NK3A76, NK3A76 sp000686125

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Oscillospiraceae, Ruminococcus

Scaffolds: 2

Genes: 3,256 Protein-coding: 3,154 RNAs: 68 pseudogenes: 34

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JMMA01000001.1 Ruminococcus sp. NK3A76 CD05DRAFT_scf7180000000014_quiver.1_C, whole genome shotgun sequence 5,680
NZ_JMMA01000002.1 Ruminococcus sp. NK3A76 CD05DRAFT_scf7180000000012_quiver_dupTrim_1992.2_C, whole genome shotgun sequence 3,555,444

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory