fast.genomicscompare 6,575 genera of bacteria & archaea

 

Proteiniclasticum ruminis DSM 24773

Genome identifier: GCF_000701905.1

NCBI assembly name: ASM70190v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Clostridiales, Clostridiaceae, Proteiniclasticum, Proteiniclasticum ruminis

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Clostridiaceae, Proteiniclasticum, Proteiniclasticum ruminis

Scaffolds: 21

Genes: 2,955 Protein-coding: 2,859 RNAs: 68 pseudogenes: 28

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JNKC01000001.1 Proteiniclasticum ruminis DSM 24773 T487DRAFT_scaffold00001.1_C, whole genome shotgun sequence 986,505
NZ_JNKC01000004.1 Proteiniclasticum ruminis DSM 24773 T487DRAFT_scaffold00003.3_C, whole genome shotgun sequence 361,833
NZ_JNKC01000005.1 Proteiniclasticum ruminis DSM 24773 T487DRAFT_scaffold00004.4_C, whole genome shotgun sequence 320,960
NZ_JNKC01000006.1 Proteiniclasticum ruminis DSM 24773 T487DRAFT_scaffold00005.5_C, whole genome shotgun sequence 240,019
NZ_JNKC01000007.1 Proteiniclasticum ruminis DSM 24773 T487DRAFT_scaffold00006.6_C, whole genome shotgun sequence 147,148
NZ_JNKC01000008.1 Proteiniclasticum ruminis DSM 24773 T487DRAFT_scaffold00007.7_C, whole genome shotgun sequence 134,052
NZ_JNKC01000009.1 Proteiniclasticum ruminis DSM 24773 T487DRAFT_scaffold00008.8_C, whole genome shotgun sequence 118,298
NZ_JNKC01000010.1 Proteiniclasticum ruminis DSM 24773 T487DRAFT_scaffold00009.9_C, whole genome shotgun sequence 89,772
NZ_JNKC01000011.1 Proteiniclasticum ruminis DSM 24773 T487DRAFT_scaffold00010.10_C, whole genome shotgun sequence 71,615
NZ_JNKC01000012.1 Proteiniclasticum ruminis DSM 24773 T487DRAFT_scaffold00011.11_C, whole genome shotgun sequence 65,321
NZ_JNKC01000016.1 Proteiniclasticum ruminis DSM 24773 T487DRAFT_scaffold00013.13_C, whole genome shotgun sequence 40,687
NZ_JNKC01000017.1 Proteiniclasticum ruminis DSM 24773 T487DRAFT_scaffold00014.14_C, whole genome shotgun sequence 29,912
NZ_JNKC01000018.1 Proteiniclasticum ruminis DSM 24773 T487DRAFT_scaffold00015.15_C, whole genome shotgun sequence 27,301
NZ_JNKC01000021.1 Proteiniclasticum ruminis DSM 24773 T487DRAFT_scaffold00017.17_C, whole genome shotgun sequence 15,871
NZ_JNKC01000022.1 Proteiniclasticum ruminis DSM 24773 T487DRAFT_scaffold00018.18_C, whole genome shotgun sequence 14,044
NZ_JNKC01000023.1 Proteiniclasticum ruminis DSM 24773 T487DRAFT_scaffold00019.19_C, whole genome shotgun sequence 3,722
NZ_JNKC01000024.1 Proteiniclasticum ruminis DSM 24773 T487DRAFT_scaffold00020.20_C, whole genome shotgun sequence 3,397
NZ_JNKC01000025.1 Proteiniclasticum ruminis DSM 24773 T487DRAFT_scaffold00021.21_C, whole genome shotgun sequence 1,288
NZ_KL370832.1 Proteiniclasticum ruminis DSM 24773 T487DRAFT_scaffold00002.2, whole genome shotgun sequence 376,993
NZ_KL370833.1 Proteiniclasticum ruminis DSM 24773 T487DRAFT_scaffold00012.12, whole genome shotgun sequence 47,721
NZ_KL370834.1 Proteiniclasticum ruminis DSM 24773 T487DRAFT_scaffold00016.16, whole genome shotgun sequence 21,842

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory