fast.genomicscompare 6,575 genera of bacteria & archaea

 

HUN007 sp000712055 HUN007

Genome identifier: GCF_000712055.1

NCBI assembly name: ASM71205v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Oscillospirales, Ruminococcaceae, HUN007, HUN007 sp000712055

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Oscillospiraceae, Ruminococcus

Scaffolds: 4

Genes: 3,739 Protein-coding: 3,535 RNAs: 96 pseudogenes: 108

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JOOA01000001.1 Ruminococcus sp. HUN007 CC97DRAFT_scf7180000000018_quiver.1_C, whole genome shotgun sequence 930,338
NZ_JOOA01000002.1 Ruminococcus sp. HUN007 CC97DRAFT_scf7180000000020_quiver.2_C, whole genome shotgun sequence 3,253,928
NZ_JOOA01000003.1 Ruminococcus sp. HUN007 CC97DRAFT_scf7180000000021_quiver.3_C, whole genome shotgun sequence 14,743
NZ_JOOA01000004.1 Ruminococcus sp. HUN007 CC97DRAFT_scf7180000000019_quiver.4_C, whole genome shotgun sequence 8,168

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory