fast.genomicscompare 6,575 genera of bacteria & archaea

 

Synergistes jonesii 78-1

Genome identifier: GCF_000712295.1

NCBI assembly name: sjonesii4.0

GTDB taxonomy: Bacteria, Synergistota, Synergistia, Synergistales, Synergistaceae, Synergistes, Synergistes jonesii

NCBI taxonomy: Bacteria, Synergistota, Synergistia, Synergistales, Synergistaceae, Synergistes, Synergistes jonesii

Scaffolds: 60

Genes: 2,641 Protein-coding: 2,553 RNAs: 65 pseudogenes: 23

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JMKI01000001.1 Synergistes jonesii strain 78-1 contig_1, whole genome shotgun sequence 1,400
NZ_JMKI01000002.1 Synergistes jonesii strain 78-1 contig_2, whole genome shotgun sequence 187,960
NZ_JMKI01000003.1 Synergistes jonesii strain 78-1 contig_3, whole genome shotgun sequence 31,715
NZ_JMKI01000004.1 Synergistes jonesii strain 78-1 contig_4, whole genome shotgun sequence 88,076
NZ_JMKI01000005.1 Synergistes jonesii strain 78-1 contig_5, whole genome shotgun sequence 109,343
NZ_JMKI01000006.1 Synergistes jonesii strain 78-1 contig_6, whole genome shotgun sequence 179,175
NZ_JMKI01000007.1 Synergistes jonesii strain 78-1 contig_7, whole genome shotgun sequence 2,899
NZ_JMKI01000008.1 Synergistes jonesii strain 78-1 contig_8, whole genome shotgun sequence 64,086
NZ_JMKI01000009.1 Synergistes jonesii strain 78-1 contig_9, whole genome shotgun sequence 18,179
NZ_JMKI01000010.1 Synergistes jonesii strain 78-1 contig_10, whole genome shotgun sequence 38,891
NZ_JMKI01000011.1 Synergistes jonesii strain 78-1 contig_11, whole genome shotgun sequence 2,483
NZ_JMKI01000012.1 Synergistes jonesii strain 78-1 contig_12, whole genome shotgun sequence 56,458
NZ_JMKI01000013.1 Synergistes jonesii strain 78-1 contig_13, whole genome shotgun sequence 5,761
NZ_JMKI01000014.1 Synergistes jonesii strain 78-1 contig_14, whole genome shotgun sequence 11,827
NZ_JMKI01000015.1 Synergistes jonesii strain 78-1 contig_15, whole genome shotgun sequence 12,539
NZ_JMKI01000016.1 Synergistes jonesii strain 78-1 contig_16, whole genome shotgun sequence 109,583
NZ_JMKI01000017.1 Synergistes jonesii strain 78-1 contig_17, whole genome shotgun sequence 2,325
NZ_JMKI01000018.1 Synergistes jonesii strain 78-1 contig_18, whole genome shotgun sequence 9,679
NZ_JMKI01000019.1 Synergistes jonesii strain 78-1 contig_19, whole genome shotgun sequence 2,183
NZ_JMKI01000020.1 Synergistes jonesii strain 78-1 contig_20, whole genome shotgun sequence 2,431
NZ_JMKI01000021.1 Synergistes jonesii strain 78-1 contig_21, whole genome shotgun sequence 142,571
NZ_JMKI01000022.1 Synergistes jonesii strain 78-1 contig_22, whole genome shotgun sequence 11,353
NZ_JMKI01000023.1 Synergistes jonesii strain 78-1 contig_23, whole genome shotgun sequence 2,263
NZ_JMKI01000024.1 Synergistes jonesii strain 78-1 contig_24, whole genome shotgun sequence 2,299
NZ_JMKI01000025.1 Synergistes jonesii strain 78-1 contig_25, whole genome shotgun sequence 4,937
NZ_JMKI01000026.1 Synergistes jonesii strain 78-1 contig_26, whole genome shotgun sequence 141,998
NZ_JMKI01000027.1 Synergistes jonesii strain 78-1 contig_27, whole genome shotgun sequence 32,593
NZ_JMKI01000028.1 Synergistes jonesii strain 78-1 contig_28, whole genome shotgun sequence 1,549
NZ_JMKI01000029.1 Synergistes jonesii strain 78-1 contig_29, whole genome shotgun sequence 2,526
NZ_JMKI01000030.1 Synergistes jonesii strain 78-1 contig_30, whole genome shotgun sequence 14,963
NZ_JMKI01000031.1 Synergistes jonesii strain 78-1 contig_31, whole genome shotgun sequence 224,225
NZ_JMKI01000032.1 Synergistes jonesii strain 78-1 contig_32, whole genome shotgun sequence 3,338
NZ_JMKI01000033.1 Synergistes jonesii strain 78-1 contig_33, whole genome shotgun sequence 1,764
NZ_JMKI01000034.1 Synergistes jonesii strain 78-1 contig_34, whole genome shotgun sequence 53,615
NZ_JMKI01000035.1 Synergistes jonesii strain 78-1 contig_35, whole genome shotgun sequence 72,355
NZ_JMKI01000036.1 Synergistes jonesii strain 78-1 contig_36, whole genome shotgun sequence 210,502
NZ_JMKI01000037.1 Synergistes jonesii strain 78-1 contig_37, whole genome shotgun sequence 216,074
NZ_JMKI01000038.1 Synergistes jonesii strain 78-1 contig_38, whole genome shotgun sequence 74,170
NZ_JMKI01000039.1 Synergistes jonesii strain 78-1 contig_39, whole genome shotgun sequence 16,625
NZ_JMKI01000040.1 Synergistes jonesii strain 78-1 contig_40, whole genome shotgun sequence 1,961
NZ_JMKI01000041.1 Synergistes jonesii strain 78-1 contig_41, whole genome shotgun sequence 2,444
NZ_JMKI01000042.1 Synergistes jonesii strain 78-1 contig_42, whole genome shotgun sequence 2,487
NZ_JMKI01000043.1 Synergistes jonesii strain 78-1 contig_43, whole genome shotgun sequence 1,857
NZ_JMKI01000044.1 Synergistes jonesii strain 78-1 contig_44, whole genome shotgun sequence 2,154
NZ_JMKI01000045.1 Synergistes jonesii strain 78-1 contig_45, whole genome shotgun sequence 58,091
NZ_JMKI01000046.1 Synergistes jonesii strain 78-1 contig_46, whole genome shotgun sequence 1,616
NZ_JMKI01000047.1 Synergistes jonesii strain 78-1 contig_47, whole genome shotgun sequence 153,904
NZ_JMKI01000048.1 Synergistes jonesii strain 78-1 contig_48, whole genome shotgun sequence 14,687
NZ_JMKI01000049.1 Synergistes jonesii strain 78-1 contig_49, whole genome shotgun sequence 5,602
NZ_JMKI01000050.1 Synergistes jonesii strain 78-1 contig_50, whole genome shotgun sequence 1,795
NZ_JMKI01000051.1 Synergistes jonesii strain 78-1 contig_51, whole genome shotgun sequence 96,255
NZ_JMKI01000052.1 Synergistes jonesii strain 78-1 contig_52, whole genome shotgun sequence 2,493
NZ_JMKI01000053.1 Synergistes jonesii strain 78-1 contig_53, whole genome shotgun sequence 59,365
NZ_JMKI01000054.1 Synergistes jonesii strain 78-1 contig_54, whole genome shotgun sequence 112,667
NZ_JMKI01000055.1 Synergistes jonesii strain 78-1 contig_55, whole genome shotgun sequence 1,748
NZ_JMKI01000056.1 Synergistes jonesii strain 78-1 contig_56, whole genome shotgun sequence 3,440
NZ_JMKI01000057.1 Synergistes jonesii strain 78-1 contig_57, whole genome shotgun sequence 4,753
NZ_JMKI01000058.1 Synergistes jonesii strain 78-1 contig_58, whole genome shotgun sequence 1,585
NZ_JMKI01000059.1 Synergistes jonesii strain 78-1 contig_59, whole genome shotgun sequence 3,185
NZ_JMKI01000060.1 Synergistes jonesii strain 78-1 contig_61, whole genome shotgun sequence 42,438

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory