fast.genomicscompare 6,575 genera of bacteria & archaea

 

Erythrobacter longus DSM 6997

Genome identifier: GCF_000715015.1

NCBI assembly name: Ery_DSM 6997_v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sphingomonadales, Sphingomonadaceae, Erythrobacter, Erythrobacter longus

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sphingomonadales, Erythrobacteraceae, Erythrobacter, Erythrobacter longus

Scaffolds: 14

Genes: 3,326 Protein-coding: 3,257 RNAs: 48 pseudogenes: 21

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JMIW01000001.1 Erythrobacter longus strain DSM 6997 contig1, whole genome shotgun sequence 1,258,909
NZ_JMIW01000002.1 Erythrobacter longus strain DSM 6997 contig2, whole genome shotgun sequence 285,016
NZ_JMIW01000003.1 Erythrobacter longus strain DSM 6997 contig3, whole genome shotgun sequence 632,880
NZ_JMIW01000004.1 Erythrobacter longus strain DSM 6997 contig4, whole genome shotgun sequence 265,796
NZ_JMIW01000005.1 Erythrobacter longus strain DSM 6997 contig5, whole genome shotgun sequence 212,323
NZ_JMIW01000006.1 Erythrobacter longus strain DSM 6997 contig6, whole genome shotgun sequence 383,375
NZ_JMIW01000007.1 Erythrobacter longus strain DSM 6997 contig7, whole genome shotgun sequence 262,859
NZ_JMIW01000008.1 Erythrobacter longus strain DSM 6997 contig8, whole genome shotgun sequence 29,605
NZ_JMIW01000009.1 Erythrobacter longus strain DSM 6997 contig9, whole genome shotgun sequence 166,395
NZ_JMIW01000010.1 Erythrobacter longus strain DSM 6997 contig10, whole genome shotgun sequence 74,746
NZ_JMIW01000011.1 Erythrobacter longus strain DSM 6997 contig11, whole genome shotgun sequence 14,940
NZ_JMIW01000012.1 Erythrobacter longus strain DSM 6997 contig12, whole genome shotgun sequence 8,840
NZ_JMIW01000013.1 Erythrobacter longus strain DSM 6997 contig13, whole genome shotgun sequence 4,673
NZ_JMIW01000014.1 Erythrobacter longus strain DSM 6997 contig14, whole genome shotgun sequence 1,805

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory