fast.genomicscompare 6,575 genera of bacteria & archaea

 

Pseudomonas_B oryzihabitans NBRC 102199

Genome identifier: GCF_000730625.1

NCBI assembly name: ASM73062v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Pseudomonadales, Pseudomonadaceae, Pseudomonas_B, Pseudomonas_B oryzihabitans

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Pseudomonadales, Pseudomonadaceae, Pseudomonas, Pseudomonas oryzihabitans

Scaffolds: 34

Genes: 4,686 Protein-coding: 4,591 RNAs: 64 pseudogenes: 31

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_BBIT01000001.1 Pseudomonas oryzihabitans NBRC 102199, whole genome shotgun sequence 330,608
NZ_BBIT01000002.1 Pseudomonas oryzihabitans NBRC 102199, whole genome shotgun sequence 953,810
NZ_BBIT01000003.1 Pseudomonas oryzihabitans NBRC 102199, whole genome shotgun sequence 24,651
NZ_BBIT01000004.1 Pseudomonas oryzihabitans NBRC 102199, whole genome shotgun sequence 70,900
NZ_BBIT01000005.1 Pseudomonas oryzihabitans NBRC 102199, whole genome shotgun sequence 770,338
NZ_BBIT01000006.1 Pseudomonas oryzihabitans NBRC 102199, whole genome shotgun sequence 55,219
NZ_BBIT01000007.1 Pseudomonas oryzihabitans NBRC 102199, whole genome shotgun sequence 10,205
NZ_BBIT01000008.1 Pseudomonas oryzihabitans NBRC 102199, whole genome shotgun sequence 58,267
NZ_BBIT01000009.1 Pseudomonas oryzihabitans NBRC 102199, whole genome shotgun sequence 509,882
NZ_BBIT01000010.1 Pseudomonas oryzihabitans NBRC 102199, whole genome shotgun sequence 135,345
NZ_BBIT01000011.1 Pseudomonas oryzihabitans NBRC 102199, whole genome shotgun sequence 101,364
NZ_BBIT01000012.1 Pseudomonas oryzihabitans NBRC 102199, whole genome shotgun sequence 5,400
NZ_BBIT01000013.1 Pseudomonas oryzihabitans NBRC 102199, whole genome shotgun sequence 433,363
NZ_BBIT01000014.1 Pseudomonas oryzihabitans NBRC 102199, whole genome shotgun sequence 343,901
NZ_BBIT01000015.1 Pseudomonas oryzihabitans NBRC 102199, whole genome shotgun sequence 32,140
NZ_BBIT01000016.1 Pseudomonas oryzihabitans NBRC 102199, whole genome shotgun sequence 101,992
NZ_BBIT01000017.1 Pseudomonas oryzihabitans NBRC 102199, whole genome shotgun sequence 108,007
NZ_BBIT01000018.1 Pseudomonas oryzihabitans NBRC 102199, whole genome shotgun sequence 63,614
NZ_BBIT01000019.1 Pseudomonas oryzihabitans NBRC 102199, whole genome shotgun sequence 196,096
NZ_BBIT01000020.1 Pseudomonas oryzihabitans NBRC 102199, whole genome shotgun sequence 186,506
NZ_BBIT01000021.1 Pseudomonas oryzihabitans NBRC 102199, whole genome shotgun sequence 96,723
NZ_BBIT01000022.1 Pseudomonas oryzihabitans NBRC 102199, whole genome shotgun sequence 36,006
NZ_BBIT01000023.1 Pseudomonas oryzihabitans NBRC 102199, whole genome shotgun sequence 84,761
NZ_BBIT01000024.1 Pseudomonas oryzihabitans NBRC 102199, whole genome shotgun sequence 83,610
NZ_BBIT01000025.1 Pseudomonas oryzihabitans NBRC 102199, whole genome shotgun sequence 66,350
NZ_BBIT01000026.1 Pseudomonas oryzihabitans NBRC 102199, whole genome shotgun sequence 62,145
NZ_BBIT01000027.1 Pseudomonas oryzihabitans NBRC 102199, whole genome shotgun sequence 29,626
NZ_BBIT01000028.1 Pseudomonas oryzihabitans NBRC 102199, whole genome shotgun sequence 21,259
NZ_BBIT01000029.1 Pseudomonas oryzihabitans NBRC 102199, whole genome shotgun sequence 15,969
NZ_BBIT01000030.1 Pseudomonas oryzihabitans NBRC 102199, whole genome shotgun sequence 15,432
NZ_BBIT01000031.1 Pseudomonas oryzihabitans NBRC 102199, whole genome shotgun sequence 14,216
NZ_BBIT01000032.1 Pseudomonas oryzihabitans NBRC 102199, whole genome shotgun sequence 7,610
NZ_BBIT01000033.1 Pseudomonas oryzihabitans NBRC 102199, whole genome shotgun sequence 1,220
NZ_BBIT01000034.1 Pseudomonas oryzihabitans NBRC 102199, whole genome shotgun sequence 1,055

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory