fast.genomicscompare 6,575 genera of bacteria & archaea

 

Methylomarinum vadi IT-4

Genome identifier: GCF_000733935.1

NCBI assembly name: ASM73393v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Methylococcales, Methylomonadaceae, Methylomarinum, Methylomarinum vadi

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Methylococcales, Methylococcaceae, Methylomarinum, Methylomarinum vadi

Scaffolds: 1

Genes: 4,066 Protein-coding: 3,871 RNAs: 61 pseudogenes: 134

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JPON01000001.1 Methylomarinum vadi strain IT-4 EP25DRAFT_scf7180000000004_quiver.1_C, whole genome shotgun sequence 4,335,162

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory