fast.genomicscompare 6,575 genera of bacteria & archaea

 

Tepidicaulis marinus MA2

Genome identifier: GCF_000739695.1

NCBI assembly name: ASM73969v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Parvibaculales, Parvibaculaceae, Tepidicaulis, Tepidicaulis marinus

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Parvibaculaceae, Tepidicaulis, Tepidicaulis marinus

Scaffolds: 46

Genes: 3,420 Protein-coding: 3,331 RNAs: 52 pseudogenes: 37

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_BBIO01000001.1 Tepidicaulis marinus strain MA2, whole genome shotgun sequence 420,028
NZ_BBIO01000002.1 Tepidicaulis marinus strain MA2, whole genome shotgun sequence 283,533
NZ_BBIO01000003.1 Tepidicaulis marinus strain MA2, whole genome shotgun sequence 273,455
NZ_BBIO01000004.1 Tepidicaulis marinus strain MA2, whole genome shotgun sequence 232,281
NZ_BBIO01000005.1 Tepidicaulis marinus strain MA2, whole genome shotgun sequence 207,896
NZ_BBIO01000006.1 Tepidicaulis marinus strain MA2, whole genome shotgun sequence 198,109
NZ_BBIO01000007.1 Tepidicaulis marinus strain MA2, whole genome shotgun sequence 167,542
NZ_BBIO01000008.1 Tepidicaulis marinus strain MA2, whole genome shotgun sequence 148,206
NZ_BBIO01000009.1 Tepidicaulis marinus strain MA2, whole genome shotgun sequence 137,388
NZ_BBIO01000010.1 Tepidicaulis marinus strain MA2, whole genome shotgun sequence 137,247
NZ_BBIO01000011.1 Tepidicaulis marinus strain MA2, whole genome shotgun sequence 134,479
NZ_BBIO01000012.1 Tepidicaulis marinus strain MA2, whole genome shotgun sequence 112,025
NZ_BBIO01000013.1 Tepidicaulis marinus strain MA2, whole genome shotgun sequence 107,632
NZ_BBIO01000014.1 Tepidicaulis marinus strain MA2, whole genome shotgun sequence 106,800
NZ_BBIO01000015.1 Tepidicaulis marinus strain MA2, whole genome shotgun sequence 96,924
NZ_BBIO01000016.1 Tepidicaulis marinus strain MA2, whole genome shotgun sequence 91,472
NZ_BBIO01000017.1 Tepidicaulis marinus strain MA2, whole genome shotgun sequence 86,743
NZ_BBIO01000018.1 Tepidicaulis marinus strain MA2, whole genome shotgun sequence 68,559
NZ_BBIO01000019.1 Tepidicaulis marinus strain MA2, whole genome shotgun sequence 65,156
NZ_BBIO01000020.1 Tepidicaulis marinus strain MA2, whole genome shotgun sequence 56,410
NZ_BBIO01000021.1 Tepidicaulis marinus strain MA2, whole genome shotgun sequence 44,234
NZ_BBIO01000022.1 Tepidicaulis marinus strain MA2, whole genome shotgun sequence 37,398
NZ_BBIO01000023.1 Tepidicaulis marinus strain MA2, whole genome shotgun sequence 33,591
NZ_BBIO01000024.1 Tepidicaulis marinus strain MA2, whole genome shotgun sequence 30,495
NZ_BBIO01000025.1 Tepidicaulis marinus strain MA2, whole genome shotgun sequence 24,519
NZ_BBIO01000026.1 Tepidicaulis marinus strain MA2, whole genome shotgun sequence 21,327
NZ_BBIO01000027.1 Tepidicaulis marinus strain MA2, whole genome shotgun sequence 18,759
NZ_BBIO01000028.1 Tepidicaulis marinus strain MA2, whole genome shotgun sequence 16,244
NZ_BBIO01000029.1 Tepidicaulis marinus strain MA2, whole genome shotgun sequence 13,277
NZ_BBIO01000030.1 Tepidicaulis marinus strain MA2, whole genome shotgun sequence 11,052
NZ_BBIO01000031.1 Tepidicaulis marinus strain MA2, whole genome shotgun sequence 10,952
NZ_BBIO01000032.1 Tepidicaulis marinus strain MA2, whole genome shotgun sequence 10,898
NZ_BBIO01000033.1 Tepidicaulis marinus strain MA2, whole genome shotgun sequence 9,057
NZ_BBIO01000034.1 Tepidicaulis marinus strain MA2, whole genome shotgun sequence 8,045
NZ_BBIO01000035.1 Tepidicaulis marinus strain MA2, whole genome shotgun sequence 7,825
NZ_BBIO01000036.1 Tepidicaulis marinus strain MA2, whole genome shotgun sequence 7,243
NZ_BBIO01000037.1 Tepidicaulis marinus strain MA2, whole genome shotgun sequence 6,489
NZ_BBIO01000038.1 Tepidicaulis marinus strain MA2, whole genome shotgun sequence 5,264
NZ_BBIO01000039.1 Tepidicaulis marinus strain MA2, whole genome shotgun sequence 4,552
NZ_BBIO01000040.1 Tepidicaulis marinus strain MA2, whole genome shotgun sequence 4,447
NZ_BBIO01000041.1 Tepidicaulis marinus strain MA2, whole genome shotgun sequence 3,886
NZ_BBIO01000042.1 Tepidicaulis marinus strain MA2, whole genome shotgun sequence 3,744
NZ_BBIO01000043.1 Tepidicaulis marinus strain MA2, whole genome shotgun sequence 3,261
NZ_BBIO01000044.1 Tepidicaulis marinus strain MA2, whole genome shotgun sequence 3,080
NZ_BBIO01000045.1 Tepidicaulis marinus strain MA2, whole genome shotgun sequence 2,200
NZ_BBIO01000046.1 Tepidicaulis marinus strain MA2, whole genome shotgun sequence 2,012

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory