fast.genomicscompare 6,575 genera of bacteria & archaea

 

Paracaedibacter acanthamoebae PRA3

Genome identifier: GCF_000742835.1

NCBI assembly name: ASM74283v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Paracaedibacterales, Paracaedibacteraceae, Paracaedibacter, Paracaedibacter acanthamoebae

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Holosporales, Candidatus Paracaedibacteraceae, Candidatus Paracaedibacter, Candidatus Paracaedibacter acanthamoebae

Scaffolds: 2

Genes: 2,320 Protein-coding: 2,200 RNAs: 52 pseudogenes: 68

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_CP008941.1 Candidatus Paracaedibacter acanthamoebae isolate PRA3 chromosome, complete genome 2,470,036
NZ_CP008942.1 Candidatus Paracaedibacter acanthamoebae isolate PRA3 plasmid unnamed, complete sequence 15,074

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory