fast.genomicscompare 6,575 genera of bacteria & archaea

 

Arenimonas donghaensis HO3-R19

Genome identifier: GCF_000743535.1

NCBI assembly name: ASM74353v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Xanthomonadales, Xanthomonadaceae, Arenimonas, Arenimonas donghaensis

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Xanthomonadales, Xanthomonadaceae, Arenimonas, Arenimonas donghaensis

Scaffolds: 51

Genes: 2,779 Protein-coding: 2,699 RNAs: 53 pseudogenes: 27

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_AVCJ01000001.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig1, whole genome shotgun sequence 595,688
NZ_AVCJ01000002.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig10, whole genome shotgun sequence 116,469
NZ_AVCJ01000003.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig11, whole genome shotgun sequence 109,812
NZ_AVCJ01000004.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig12, whole genome shotgun sequence 92,113
NZ_AVCJ01000005.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig13, whole genome shotgun sequence 88,655
NZ_AVCJ01000006.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig14, whole genome shotgun sequence 83,212
NZ_AVCJ01000007.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig15, whole genome shotgun sequence 82,859
NZ_AVCJ01000008.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig16, whole genome shotgun sequence 37,323
NZ_AVCJ01000009.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig17, whole genome shotgun sequence 33,302
NZ_AVCJ01000010.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig18, whole genome shotgun sequence 67,856
NZ_AVCJ01000011.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig19, whole genome shotgun sequence 59,664
NZ_AVCJ01000012.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig2, whole genome shotgun sequence 347,362
NZ_AVCJ01000013.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig20, whole genome shotgun sequence 49,604
NZ_AVCJ01000014.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig21, whole genome shotgun sequence 43,323
NZ_AVCJ01000015.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig22, whole genome shotgun sequence 36,972
NZ_AVCJ01000016.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig23, whole genome shotgun sequence 31,228
NZ_AVCJ01000017.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig24, whole genome shotgun sequence 24,358
NZ_AVCJ01000018.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig25, whole genome shotgun sequence 20,352
NZ_AVCJ01000019.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig26, whole genome shotgun sequence 15,767
NZ_AVCJ01000020.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig27, whole genome shotgun sequence 15,076
NZ_AVCJ01000021.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig28, whole genome shotgun sequence 12,741
NZ_AVCJ01000022.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig29, whole genome shotgun sequence 12,247
NZ_AVCJ01000023.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig3, whole genome shotgun sequence 218,928
NZ_AVCJ01000024.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig30, whole genome shotgun sequence 10,631
NZ_AVCJ01000025.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig31, whole genome shotgun sequence 3,207
NZ_AVCJ01000026.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig32, whole genome shotgun sequence 3,090
NZ_AVCJ01000027.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig33, whole genome shotgun sequence 3,072
NZ_AVCJ01000028.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig34, whole genome shotgun sequence 2,647
NZ_AVCJ01000029.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig35, whole genome shotgun sequence 2,258
NZ_AVCJ01000030.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig36, whole genome shotgun sequence 1,194
NZ_AVCJ01000031.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig37, whole genome shotgun sequence 1,149
NZ_AVCJ01000032.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig38, whole genome shotgun sequence 1,140
NZ_AVCJ01000033.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig39, whole genome shotgun sequence 998
NZ_AVCJ01000034.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig4, whole genome shotgun sequence 173,850
NZ_AVCJ01000035.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig40, whole genome shotgun sequence 604
NZ_AVCJ01000036.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig41, whole genome shotgun sequence 564
NZ_AVCJ01000037.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig42, whole genome shotgun sequence 532
NZ_AVCJ01000038.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig43, whole genome shotgun sequence 220
NZ_AVCJ01000039.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig44, whole genome shotgun sequence 226
NZ_AVCJ01000040.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig45, whole genome shotgun sequence 417
NZ_AVCJ01000041.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig47, whole genome shotgun sequence 289
NZ_AVCJ01000042.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig48, whole genome shotgun sequence 409
NZ_AVCJ01000043.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig5, whole genome shotgun sequence 159,562
NZ_AVCJ01000044.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig51, whole genome shotgun sequence 224
NZ_AVCJ01000045.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig53, whole genome shotgun sequence 380
NZ_AVCJ01000046.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig54, whole genome shotgun sequence 319
NZ_AVCJ01000047.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig55, whole genome shotgun sequence 319
NZ_AVCJ01000048.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig6, whole genome shotgun sequence 98,953
NZ_AVCJ01000049.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig7, whole genome shotgun sequence 53,209
NZ_AVCJ01000050.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig8, whole genome shotgun sequence 135,042
NZ_AVCJ01000051.1 Arenimonas donghaensis DSM 18148 = HO3-R19 contig9, whole genome shotgun sequence 127,640

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory