fast.genomicscompare 6,575 genera of bacteria & archaea

 

Devosia riboflavina IFO13584

Genome identifier: GCF_000743575.1

NCBI assembly name: ASM74357v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Devosiaceae, Devosia, Devosia riboflavina

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Devosiaceae, Devosia, Devosia riboflavina

Scaffolds: 113

Genes: 5,020 Protein-coding: 4,893 RNAs: 56 pseudogenes: 71

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JQGC01000001.1 Devosia riboflavina strain IFO13584 contig1, whole genome shotgun sequence 482,134
NZ_JQGC01000002.1 Devosia riboflavina strain IFO13584 contig2, whole genome shotgun sequence 244,648
NZ_JQGC01000003.1 Devosia riboflavina strain IFO13584 contig3, whole genome shotgun sequence 443,331
NZ_JQGC01000004.1 Devosia riboflavina strain IFO13584 contig4, whole genome shotgun sequence 195,808
NZ_JQGC01000005.1 Devosia riboflavina strain IFO13584 contig5, whole genome shotgun sequence 121,888
NZ_JQGC01000006.1 Devosia riboflavina strain IFO13584 contig6, whole genome shotgun sequence 387,106
NZ_JQGC01000007.1 Devosia riboflavina strain IFO13584 contig7, whole genome shotgun sequence 290,740
NZ_JQGC01000008.1 Devosia riboflavina strain IFO13584 contig8, whole genome shotgun sequence 49,951
NZ_JQGC01000009.1 Devosia riboflavina strain IFO13584 contig9, whole genome shotgun sequence 202,691
NZ_JQGC01000010.1 Devosia riboflavina strain IFO13584 contig10, whole genome shotgun sequence 174,287
NZ_JQGC01000011.1 Devosia riboflavina strain IFO13584 contig11, whole genome shotgun sequence 93,546
NZ_JQGC01000012.1 Devosia riboflavina strain IFO13584 contig12, whole genome shotgun sequence 162,653
NZ_JQGC01000013.1 Devosia riboflavina strain IFO13584 contig13, whole genome shotgun sequence 165,206
NZ_JQGC01000014.1 Devosia riboflavina strain IFO13584 contig14, whole genome shotgun sequence 99,104
NZ_JQGC01000015.1 Devosia riboflavina strain IFO13584 contig15, whole genome shotgun sequence 259,470
NZ_JQGC01000016.1 Devosia riboflavina strain IFO13584 contig16, whole genome shotgun sequence 21,960
NZ_JQGC01000017.1 Devosia riboflavina strain IFO13584 contig17, whole genome shotgun sequence 233,015
NZ_JQGC01000018.1 Devosia riboflavina strain IFO13584 contig18, whole genome shotgun sequence 13,193
NZ_JQGC01000019.1 Devosia riboflavina strain IFO13584 contig19, whole genome shotgun sequence 108,661
NZ_JQGC01000020.1 Devosia riboflavina strain IFO13584 contig20, whole genome shotgun sequence 110,186
NZ_JQGC01000021.1 Devosia riboflavina strain IFO13584 contig21, whole genome shotgun sequence 19,199
NZ_JQGC01000022.1 Devosia riboflavina strain IFO13584 contig22, whole genome shotgun sequence 119,527
NZ_JQGC01000023.1 Devosia riboflavina strain IFO13584 contig23, whole genome shotgun sequence 19,671
NZ_JQGC01000024.1 Devosia riboflavina strain IFO13584 contig24, whole genome shotgun sequence 60,064
NZ_JQGC01000025.1 Devosia riboflavina strain IFO13584 contig25, whole genome shotgun sequence 43,406
NZ_JQGC01000026.1 Devosia riboflavina strain IFO13584 contig26, whole genome shotgun sequence 84,402
NZ_JQGC01000027.1 Devosia riboflavina strain IFO13584 contig27, whole genome shotgun sequence 124,598
NZ_JQGC01000028.1 Devosia riboflavina strain IFO13584 contig28, whole genome shotgun sequence 84,969
NZ_JQGC01000029.1 Devosia riboflavina strain IFO13584 contig29, whole genome shotgun sequence 858
NZ_JQGC01000030.1 Devosia riboflavina strain IFO13584 contig30, whole genome shotgun sequence 116,394
NZ_JQGC01000031.1 Devosia riboflavina strain IFO13584 contig31, whole genome shotgun sequence 46,210
NZ_JQGC01000032.1 Devosia riboflavina strain IFO13584 contig32, whole genome shotgun sequence 5,543
NZ_JQGC01000033.1 Devosia riboflavina strain IFO13584 contig33, whole genome shotgun sequence 209,083
NZ_JQGC01000034.1 Devosia riboflavina strain IFO13584 contig34, whole genome shotgun sequence 22,456
NZ_JQGC01000035.1 Devosia riboflavina strain IFO13584 contig35, whole genome shotgun sequence 66,269
NZ_JQGC01000036.1 Devosia riboflavina strain IFO13584 contig36, whole genome shotgun sequence 17,000
NZ_JQGC01000037.1 Devosia riboflavina strain IFO13584 contig37, whole genome shotgun sequence 29,382
NZ_JQGC01000038.1 Devosia riboflavina strain IFO13584 contig38, whole genome shotgun sequence 8,807
NZ_JQGC01000039.1 Devosia riboflavina strain IFO13584 contig39, whole genome shotgun sequence 1,510
NZ_JQGC01000040.1 Devosia riboflavina strain IFO13584 contig40, whole genome shotgun sequence 12,097
NZ_JQGC01000041.1 Devosia riboflavina strain IFO13584 contig41, whole genome shotgun sequence 13,728
NZ_JQGC01000042.1 Devosia riboflavina strain IFO13584 contig42, whole genome shotgun sequence 1,485
NZ_JQGC01000043.1 Devosia riboflavina strain IFO13584 contig43, whole genome shotgun sequence 5,603
NZ_JQGC01000044.1 Devosia riboflavina strain IFO13584 contig44, whole genome shotgun sequence 678
NZ_JQGC01000045.1 Devosia riboflavina strain IFO13584 contig45, whole genome shotgun sequence 503
NZ_JQGC01000046.1 Devosia riboflavina strain IFO13584 contig46, whole genome shotgun sequence 968
NZ_JQGC01000047.1 Devosia riboflavina strain IFO13584 contig47, whole genome shotgun sequence 4,415
NZ_JQGC01000048.1 Devosia riboflavina strain IFO13584 contig48, whole genome shotgun sequence 20,614
NZ_JQGC01000049.1 Devosia riboflavina strain IFO13584 contig49, whole genome shotgun sequence 780
NZ_JQGC01000050.1 Devosia riboflavina strain IFO13584 contig50, whole genome shotgun sequence 3,583
NZ_JQGC01000051.1 Devosia riboflavina strain IFO13584 contig51, whole genome shotgun sequence 602
NZ_JQGC01000052.1 Devosia riboflavina strain IFO13584 contig52, whole genome shotgun sequence 1,141
NZ_JQGC01000053.1 Devosia riboflavina strain IFO13584 contig53, whole genome shotgun sequence 991
NZ_JQGC01000054.1 Devosia riboflavina strain IFO13584 contig54, whole genome shotgun sequence 555
NZ_JQGC01000055.1 Devosia riboflavina strain IFO13584 contig55, whole genome shotgun sequence 674
NZ_JQGC01000056.1 Devosia riboflavina strain IFO13584 contig56, whole genome shotgun sequence 903
NZ_JQGC01000057.1 Devosia riboflavina strain IFO13584 contig57, whole genome shotgun sequence 868
NZ_JQGC01000058.1 Devosia riboflavina strain IFO13584 contig58, whole genome shotgun sequence 760
NZ_JQGC01000059.1 Devosia riboflavina strain IFO13584 contig59, whole genome shotgun sequence 950
NZ_JQGC01000060.1 Devosia riboflavina strain IFO13584 contig60, whole genome shotgun sequence 722
NZ_JQGC01000061.1 Devosia riboflavina strain IFO13584 contig61, whole genome shotgun sequence 1,014
NZ_JQGC01000062.1 Devosia riboflavina strain IFO13584 contig62, whole genome shotgun sequence 643
NZ_JQGC01000063.1 Devosia riboflavina strain IFO13584 contig63, whole genome shotgun sequence 675
NZ_JQGC01000064.1 Devosia riboflavina strain IFO13584 contig64, whole genome shotgun sequence 722
NZ_JQGC01000065.1 Devosia riboflavina strain IFO13584 contig65, whole genome shotgun sequence 750
NZ_JQGC01000066.1 Devosia riboflavina strain IFO13584 contig66, whole genome shotgun sequence 696
NZ_JQGC01000067.1 Devosia riboflavina strain IFO13584 contig67, whole genome shotgun sequence 1,203
NZ_JQGC01000068.1 Devosia riboflavina strain IFO13584 contig68, whole genome shotgun sequence 1,348
NZ_JQGC01000069.1 Devosia riboflavina strain IFO13584 contig69, whole genome shotgun sequence 790
NZ_JQGC01000070.1 Devosia riboflavina strain IFO13584 contig70, whole genome shotgun sequence 543
NZ_JQGC01000071.1 Devosia riboflavina strain IFO13584 contig71, whole genome shotgun sequence 641
NZ_JQGC01000072.1 Devosia riboflavina strain IFO13584 contig72, whole genome shotgun sequence 706
NZ_JQGC01000073.1 Devosia riboflavina strain IFO13584 contig73, whole genome shotgun sequence 754
NZ_JQGC01000074.1 Devosia riboflavina strain IFO13584 contig74, whole genome shotgun sequence 761
NZ_JQGC01000075.1 Devosia riboflavina strain IFO13584 contig75, whole genome shotgun sequence 770
NZ_JQGC01000076.1 Devosia riboflavina strain IFO13584 contig76, whole genome shotgun sequence 705
NZ_JQGC01000077.1 Devosia riboflavina strain IFO13584 contig77, whole genome shotgun sequence 667
NZ_JQGC01000078.1 Devosia riboflavina strain IFO13584 contig78, whole genome shotgun sequence 723
NZ_JQGC01000079.1 Devosia riboflavina strain IFO13584 contig79, whole genome shotgun sequence 833
NZ_JQGC01000080.1 Devosia riboflavina strain IFO13584 contig80, whole genome shotgun sequence 951
NZ_JQGC01000081.1 Devosia riboflavina strain IFO13584 contig81, whole genome shotgun sequence 730
NZ_JQGC01000082.1 Devosia riboflavina strain IFO13584 contig82, whole genome shotgun sequence 1,010
NZ_JQGC01000083.1 Devosia riboflavina strain IFO13584 contig83, whole genome shotgun sequence 866
NZ_JQGC01000084.1 Devosia riboflavina strain IFO13584 contig84, whole genome shotgun sequence 804
NZ_JQGC01000085.1 Devosia riboflavina strain IFO13584 contig85, whole genome shotgun sequence 591
NZ_JQGC01000086.1 Devosia riboflavina strain IFO13584 contig86, whole genome shotgun sequence 665
NZ_JQGC01000087.1 Devosia riboflavina strain IFO13584 contig87, whole genome shotgun sequence 937
NZ_JQGC01000088.1 Devosia riboflavina strain IFO13584 contig88, whole genome shotgun sequence 693
NZ_JQGC01000089.1 Devosia riboflavina strain IFO13584 contig89, whole genome shotgun sequence 605
NZ_JQGC01000090.1 Devosia riboflavina strain IFO13584 contig90, whole genome shotgun sequence 783
NZ_JQGC01000091.1 Devosia riboflavina strain IFO13584 contig91, whole genome shotgun sequence 701
NZ_JQGC01000092.1 Devosia riboflavina strain IFO13584 contig92, whole genome shotgun sequence 679
NZ_JQGC01000093.1 Devosia riboflavina strain IFO13584 contig93, whole genome shotgun sequence 576
NZ_JQGC01000094.1 Devosia riboflavina strain IFO13584 contig94, whole genome shotgun sequence 1,178
NZ_JQGC01000095.1 Devosia riboflavina strain IFO13584 contig95, whole genome shotgun sequence 639
NZ_JQGC01000096.1 Devosia riboflavina strain IFO13584 contig96, whole genome shotgun sequence 633
NZ_JQGC01000097.1 Devosia riboflavina strain IFO13584 contig97, whole genome shotgun sequence 702
NZ_JQGC01000098.1 Devosia riboflavina strain IFO13584 contig98, whole genome shotgun sequence 857
NZ_JQGC01000099.1 Devosia riboflavina strain IFO13584 contig99, whole genome shotgun sequence 577
NZ_JQGC01000100.1 Devosia riboflavina strain IFO13584 contig100, whole genome shotgun sequence 744
NZ_JQGC01000101.1 Devosia riboflavina strain IFO13584 contig101, whole genome shotgun sequence 692
NZ_JQGC01000102.1 Devosia riboflavina strain IFO13584 contig102, whole genome shotgun sequence 622
NZ_JQGC01000103.1 Devosia riboflavina strain IFO13584 contig103, whole genome shotgun sequence 1,029
NZ_JQGC01000104.1 Devosia riboflavina strain IFO13584 contig104, whole genome shotgun sequence 854
NZ_JQGC01000105.1 Devosia riboflavina strain IFO13584 contig105, whole genome shotgun sequence 708
NZ_JQGC01000106.1 Devosia riboflavina strain IFO13584 contig106, whole genome shotgun sequence 883
NZ_JQGC01000107.1 Devosia riboflavina strain IFO13584 contig107, whole genome shotgun sequence 643
NZ_JQGC01000108.1 Devosia riboflavina strain IFO13584 contig108, whole genome shotgun sequence 566
NZ_JQGC01000109.1 Devosia riboflavina strain IFO13584 contig109, whole genome shotgun sequence 784
NZ_JQGC01000110.1 Devosia riboflavina strain IFO13584 contig110, whole genome shotgun sequence 1,056
NZ_JQGC01000111.1 Devosia riboflavina strain IFO13584 contig111, whole genome shotgun sequence 662
NZ_JQGC01000112.1 Devosia riboflavina strain IFO13584 contig112, whole genome shotgun sequence 697
NZ_JQGC01000113.1 Devosia riboflavina strain IFO13584 contig113, whole genome shotgun sequence 627

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory