fast.genomicscompare 6,575 genera of bacteria & archaea

 

Mesoaciditoga lauensis DSM 25116

Genome identifier: GCF_000745455.1

NCBI assembly name: ASM74545v1

GTDB taxonomy: Bacteria, Thermotogota, Thermotogae, Mesoaciditogales, Mesoaciditogaceae, Mesoaciditoga, Mesoaciditoga lauensis

NCBI taxonomy: Bacteria, Thermotogota, Thermotogae, Mesoaciditogales, Mesoaciditogaceae, Mesoaciditoga, Mesoaciditoga lauensis

Scaffolds: 65

Genes: 2,068 Protein-coding: 1,978 RNAs: 56 pseudogenes: 34

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JQJI01000001.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00001.1_C, whole genome shotgun sequence 174,379
NZ_JQJI01000002.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00002.2_C, whole genome shotgun sequence 159,316
NZ_JQJI01000007.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00005.5_C, whole genome shotgun sequence 112,860
NZ_JQJI01000008.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00006.6_C, whole genome shotgun sequence 85,662
NZ_JQJI01000009.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00007.7_C, whole genome shotgun sequence 79,907
NZ_JQJI01000010.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00008.8_C, whole genome shotgun sequence 62,206
NZ_JQJI01000011.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00009.9_C, whole genome shotgun sequence 61,716
NZ_JQJI01000012.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00010.10_C, whole genome shotgun sequence 60,823
NZ_JQJI01000013.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00011.11_C, whole genome shotgun sequence 58,387
NZ_JQJI01000014.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00012.12_C, whole genome shotgun sequence 53,743
NZ_JQJI01000015.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00013.13_C, whole genome shotgun sequence 49,082
NZ_JQJI01000016.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00014.14_C, whole genome shotgun sequence 48,127
NZ_JQJI01000017.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00015.15_C, whole genome shotgun sequence 46,650
NZ_JQJI01000018.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00016.16_C, whole genome shotgun sequence 44,633
NZ_JQJI01000019.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00017.17_C, whole genome shotgun sequence 44,475
NZ_JQJI01000020.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00018.18_C, whole genome shotgun sequence 44,034
NZ_JQJI01000021.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00019.19_C, whole genome shotgun sequence 42,496
NZ_JQJI01000022.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00020.20_C, whole genome shotgun sequence 38,726
NZ_JQJI01000023.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00021.21_C, whole genome shotgun sequence 38,606
NZ_JQJI01000024.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00022.22_C, whole genome shotgun sequence 34,738
NZ_JQJI01000025.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00023.23_C, whole genome shotgun sequence 34,725
NZ_JQJI01000026.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00024.24_C, whole genome shotgun sequence 33,496
NZ_JQJI01000027.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00025.25_C, whole genome shotgun sequence 33,269
NZ_JQJI01000028.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00026.26_C, whole genome shotgun sequence 31,541
NZ_JQJI01000029.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00027.27_C, whole genome shotgun sequence 31,078
NZ_JQJI01000030.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00028.28_C, whole genome shotgun sequence 30,927
NZ_JQJI01000031.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00029.29_C, whole genome shotgun sequence 30,336
NZ_JQJI01000032.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00030.30_C, whole genome shotgun sequence 29,233
NZ_JQJI01000033.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00031.31_C, whole genome shotgun sequence 26,809
NZ_JQJI01000034.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00032.32_C, whole genome shotgun sequence 25,384
NZ_JQJI01000035.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00033.33_C, whole genome shotgun sequence 21,688
NZ_JQJI01000036.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00034.34_C, whole genome shotgun sequence 20,030
NZ_JQJI01000037.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00035.35_C, whole genome shotgun sequence 17,228
NZ_JQJI01000038.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00036.36_C, whole genome shotgun sequence 16,305
NZ_JQJI01000039.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00037.37_C, whole genome shotgun sequence 15,661
NZ_JQJI01000040.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00038.38_C, whole genome shotgun sequence 14,007
NZ_JQJI01000041.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00039.39_C, whole genome shotgun sequence 13,272
NZ_JQJI01000042.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00040.40_C, whole genome shotgun sequence 12,196
NZ_JQJI01000043.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00041.41_C, whole genome shotgun sequence 12,045
NZ_JQJI01000044.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00042.42_C, whole genome shotgun sequence 10,674
NZ_JQJI01000045.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00043.43_C, whole genome shotgun sequence 8,882
NZ_JQJI01000046.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00044.44_C, whole genome shotgun sequence 8,788
NZ_JQJI01000047.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00045.45_C, whole genome shotgun sequence 8,369
NZ_JQJI01000048.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00046.46_C, whole genome shotgun sequence 6,945
NZ_JQJI01000049.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00047.47_C, whole genome shotgun sequence 6,727
NZ_JQJI01000050.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00048.48_C, whole genome shotgun sequence 6,401
NZ_JQJI01000051.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00049.49_C, whole genome shotgun sequence 6,355
NZ_JQJI01000052.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00050.50_C, whole genome shotgun sequence 6,294
NZ_JQJI01000053.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00051.51_C, whole genome shotgun sequence 6,147
NZ_JQJI01000054.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00052.52_C, whole genome shotgun sequence 4,943
NZ_JQJI01000055.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00053.53_C, whole genome shotgun sequence 4,891
NZ_JQJI01000056.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00054.54_C, whole genome shotgun sequence 3,560
NZ_JQJI01000057.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00055.55_C, whole genome shotgun sequence 3,284
NZ_JQJI01000058.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00056.56_C, whole genome shotgun sequence 2,591
NZ_JQJI01000059.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00057.57_C, whole genome shotgun sequence 2,401
NZ_JQJI01000060.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00058.58_C, whole genome shotgun sequence 2,294
NZ_JQJI01000061.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00059.59_C, whole genome shotgun sequence 2,071
NZ_JQJI01000062.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00060.60_C, whole genome shotgun sequence 1,579
NZ_JQJI01000063.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00061.61_C, whole genome shotgun sequence 1,461
NZ_JQJI01000064.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00062.62_C, whole genome shotgun sequence 1,302
NZ_JQJI01000065.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00063.63_C, whole genome shotgun sequence 1,227
NZ_JQJI01000066.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00064.64_C, whole genome shotgun sequence 1,118
NZ_JQJI01000067.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00065.65_C, whole genome shotgun sequence 1,024
NZ_KN050690.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00003.3, whole genome shotgun sequence 147,999
NZ_KN050691.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00004.4, whole genome shotgun sequence 125,346

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory