fast.genomicscompare 6,575 genera of bacteria & archaea

 

Helicobacter_A trogontum ATCC 700114

Genome identifier: GCF_000765905.2

NCBI assembly name: ASM76590v2

GTDB taxonomy: Bacteria, Campylobacterota, Campylobacteria, Campylobacterales, Helicobacteraceae, Helicobacter_A, Helicobacter_A trogontum

NCBI taxonomy: Bacteria, Campylobacterota, Epsilonproteobacteria, Campylobacterales, Helicobacteraceae, Helicobacter, Helicobacter trogontum

Scaffolds: 121

Genes: 2,301 Protein-coding: 2,183 RNAs: 42 pseudogenes: 76

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JRPL02000001.1 Helicobacter trogontum strain ATCC 700114 NODE_1_length_201759_cov_69.9323, whole genome shotgun sequence 201,759
NZ_JRPL02000002.1 Helicobacter trogontum strain ATCC 700114 NODE_2_length_200793_cov_64.9156, whole genome shotgun sequence 200,793
NZ_JRPL02000003.1 Helicobacter trogontum strain ATCC 700114 NODE_3_length_162887_cov_51.5394, whole genome shotgun sequence 162,887
NZ_JRPL02000004.1 Helicobacter trogontum strain ATCC 700114 NODE_4_length_136682_cov_48.1873, whole genome shotgun sequence 136,682
NZ_JRPL02000005.1 Helicobacter trogontum strain ATCC 700114 NODE_5_length_119251_cov_55.3326, whole genome shotgun sequence 119,251
NZ_JRPL02000006.1 Helicobacter trogontum strain ATCC 700114 NODE_6_length_113921_cov_59.5376, whole genome shotgun sequence 113,921
NZ_JRPL02000007.1 Helicobacter trogontum strain ATCC 700114 NODE_7_length_112582_cov_45.6475, whole genome shotgun sequence 112,582
NZ_JRPL02000008.1 Helicobacter trogontum strain ATCC 700114 NODE_8_length_103115_cov_51.0353, whole genome shotgun sequence 103,115
NZ_JRPL02000009.1 Helicobacter trogontum strain ATCC 700114 NODE_9_length_87133_cov_65.8891, whole genome shotgun sequence 87,133
NZ_JRPL02000010.1 Helicobacter trogontum strain ATCC 700114 NODE_10_length_83802_cov_38.6013, whole genome shotgun sequence 83,802
NZ_JRPL02000011.1 Helicobacter trogontum strain ATCC 700114 NODE_11_length_75633_cov_54.4866, whole genome shotgun sequence 75,633
NZ_JRPL02000012.1 Helicobacter trogontum strain ATCC 700114 NODE_12_length_64190_cov_39.9669, whole genome shotgun sequence 64,190
NZ_JRPL02000013.1 Helicobacter trogontum strain ATCC 700114 NODE_13_length_50644_cov_41.8562, whole genome shotgun sequence 50,644
NZ_JRPL02000014.1 Helicobacter trogontum strain ATCC 700114 NODE_14_length_49139_cov_46.6942, whole genome shotgun sequence 49,139
NZ_JRPL02000015.1 Helicobacter trogontum strain ATCC 700114 NODE_15_length_48197_cov_47.6445, whole genome shotgun sequence 48,197
NZ_JRPL02000016.1 Helicobacter trogontum strain ATCC 700114 NODE_16_length_47693_cov_42.9344, whole genome shotgun sequence 47,693
NZ_JRPL02000017.1 Helicobacter trogontum strain ATCC 700114 NODE_17_length_47546_cov_59.2754, whole genome shotgun sequence 47,546
NZ_JRPL02000018.1 Helicobacter trogontum strain ATCC 700114 NODE_18_length_43737_cov_41.7377, whole genome shotgun sequence 43,737
NZ_JRPL02000019.1 Helicobacter trogontum strain ATCC 700114 NODE_19_length_41849_cov_38.4064, whole genome shotgun sequence 41,849
NZ_JRPL02000020.1 Helicobacter trogontum strain ATCC 700114 NODE_20_length_40818_cov_43.0519, whole genome shotgun sequence 40,818
NZ_JRPL02000021.1 Helicobacter trogontum strain ATCC 700114 NODE_21_length_40751_cov_47.6973, whole genome shotgun sequence 40,751
NZ_JRPL02000022.1 Helicobacter trogontum strain ATCC 700114 NODE_22_length_40604_cov_56.6266, whole genome shotgun sequence 40,604
NZ_JRPL02000023.1 Helicobacter trogontum strain ATCC 700114 NODE_23_length_39171_cov_61.2392, whole genome shotgun sequence 39,171
NZ_JRPL02000024.1 Helicobacter trogontum strain ATCC 700114 NODE_24_length_32358_cov_46.6016, whole genome shotgun sequence 32,358
NZ_JRPL02000025.1 Helicobacter trogontum strain ATCC 700114 NODE_25_length_32134_cov_264.97, whole genome shotgun sequence 32,134
NZ_JRPL02000026.1 Helicobacter trogontum strain ATCC 700114 NODE_26_length_31186_cov_44.7071, whole genome shotgun sequence 31,186
NZ_JRPL02000027.1 Helicobacter trogontum strain ATCC 700114 NODE_27_length_30058_cov_36.8724, whole genome shotgun sequence 30,058
NZ_JRPL02000028.1 Helicobacter trogontum strain ATCC 700114 NODE_28_length_22644_cov_67.6241, whole genome shotgun sequence 22,644
NZ_JRPL02000029.1 Helicobacter trogontum strain ATCC 700114 NODE_29_length_20889_cov_66.8062, whole genome shotgun sequence 20,889
NZ_JRPL02000030.1 Helicobacter trogontum strain ATCC 700114 NODE_30_length_18594_cov_69.4615, whole genome shotgun sequence 18,594
NZ_JRPL02000031.1 Helicobacter trogontum strain ATCC 700114 NODE_31_length_15420_cov_47.8255, whole genome shotgun sequence 15,420
NZ_JRPL02000032.1 Helicobacter trogontum strain ATCC 700114 NODE_32_length_14674_cov_104.723, whole genome shotgun sequence 14,674
NZ_JRPL02000033.1 Helicobacter trogontum strain ATCC 700114 NODE_33_length_14499_cov_105.713, whole genome shotgun sequence 14,499
NZ_JRPL02000034.1 Helicobacter trogontum strain ATCC 700114 NODE_34_length_13399_cov_57.153, whole genome shotgun sequence 13,399
NZ_JRPL02000035.1 Helicobacter trogontum strain ATCC 700114 NODE_35_length_11660_cov_58.1742, whole genome shotgun sequence 11,660
NZ_JRPL02000036.1 Helicobacter trogontum strain ATCC 700114 NODE_36_length_11203_cov_48.9152, whole genome shotgun sequence 11,203
NZ_JRPL02000037.1 Helicobacter trogontum strain ATCC 700114 NODE_37_length_10277_cov_47.9664, whole genome shotgun sequence 10,277
NZ_JRPL02000038.1 Helicobacter trogontum strain ATCC 700114 NODE_38_length_8992_cov_54.3051, whole genome shotgun sequence 8,992
NZ_JRPL02000039.1 Helicobacter trogontum strain ATCC 700114 NODE_39_length_8751_cov_40.8893, whole genome shotgun sequence 8,751
NZ_JRPL02000040.1 Helicobacter trogontum strain ATCC 700114 NODE_40_length_7755_cov_58.2867, whole genome shotgun sequence 7,755
NZ_JRPL02000041.1 Helicobacter trogontum strain ATCC 700114 NODE_41_length_7749_cov_41.2013, whole genome shotgun sequence 7,749
NZ_JRPL02000042.1 Helicobacter trogontum strain ATCC 700114 NODE_42_length_7598_cov_47.1071, whole genome shotgun sequence 7,598
NZ_JRPL02000043.1 Helicobacter trogontum strain ATCC 700114 NODE_43_length_7557_cov_99.1028, whole genome shotgun sequence 7,557
NZ_JRPL02000044.1 Helicobacter trogontum strain ATCC 700114 NODE_44_length_7362_cov_122.416, whole genome shotgun sequence 7,362
NZ_JRPL02000045.1 Helicobacter trogontum strain ATCC 700114 NODE_45_length_6965_cov_39.7156, whole genome shotgun sequence 6,965
NZ_JRPL02000046.1 Helicobacter trogontum strain ATCC 700114 NODE_46_length_6475_cov_41.8483, whole genome shotgun sequence 6,475
NZ_JRPL02000047.1 Helicobacter trogontum strain ATCC 700114 NODE_47_length_6386_cov_36.6789, whole genome shotgun sequence 6,386
NZ_JRPL02000048.1 Helicobacter trogontum strain ATCC 700114 NODE_48_length_6370_cov_41.5545, whole genome shotgun sequence 6,370
NZ_JRPL02000049.1 Helicobacter trogontum strain ATCC 700114 NODE_49_length_6196_cov_43.1855, whole genome shotgun sequence 6,196
NZ_JRPL02000050.1 Helicobacter trogontum strain ATCC 700114 NODE_50_length_5940_cov_111.567, whole genome shotgun sequence 5,940
NZ_JRPL02000051.1 Helicobacter trogontum strain ATCC 700114 NODE_51_length_5753_cov_44.5585, whole genome shotgun sequence 5,753
NZ_JRPL02000052.1 Helicobacter trogontum strain ATCC 700114 NODE_52_length_5408_cov_72.0365, whole genome shotgun sequence 5,408
NZ_JRPL02000053.1 Helicobacter trogontum strain ATCC 700114 NODE_53_length_4810_cov_52.3021, whole genome shotgun sequence 4,810
NZ_JRPL02000054.1 Helicobacter trogontum strain ATCC 700114 NODE_54_length_4527_cov_106.633, whole genome shotgun sequence 4,527
NZ_JRPL02000055.1 Helicobacter trogontum strain ATCC 700114 NODE_55_length_4516_cov_53.9846, whole genome shotgun sequence 4,516
NZ_JRPL02000056.1 Helicobacter trogontum strain ATCC 700114 NODE_56_length_4407_cov_147.529, whole genome shotgun sequence 4,407
NZ_JRPL02000057.1 Helicobacter trogontum strain ATCC 700114 NODE_57_length_4032_cov_119.831, whole genome shotgun sequence 4,032
NZ_JRPL02000058.1 Helicobacter trogontum strain ATCC 700114 NODE_58_length_3516_cov_48.1276, whole genome shotgun sequence 3,516
NZ_JRPL02000059.1 Helicobacter trogontum strain ATCC 700114 NODE_59_length_3491_cov_47.3387, whole genome shotgun sequence 3,491
NZ_JRPL02000060.1 Helicobacter trogontum strain ATCC 700114 NODE_60_length_3422_cov_101.27, whole genome shotgun sequence 3,422
NZ_JRPL02000061.1 Helicobacter trogontum strain ATCC 700114 NODE_61_length_3210_cov_106.109, whole genome shotgun sequence 3,210
NZ_JRPL02000062.1 Helicobacter trogontum strain ATCC 700114 NODE_62_length_3146_cov_81.4946, whole genome shotgun sequence 3,146
NZ_JRPL02000063.1 Helicobacter trogontum strain ATCC 700114 NODE_63_length_2828_cov_138.519, whole genome shotgun sequence 2,828
NZ_JRPL02000064.1 Helicobacter trogontum strain ATCC 700114 NODE_64_length_2738_cov_36.5638, whole genome shotgun sequence 2,738
NZ_JRPL02000065.1 Helicobacter trogontum strain ATCC 700114 NODE_65_length_2714_cov_54.8562, whole genome shotgun sequence 2,714
NZ_JRPL02000066.1 Helicobacter trogontum strain ATCC 700114 NODE_66_length_2601_cov_42.3501, whole genome shotgun sequence 2,601
NZ_JRPL02000067.1 Helicobacter trogontum strain ATCC 700114 NODE_67_length_2404_cov_46.095, whole genome shotgun sequence 2,404
NZ_JRPL02000068.1 Helicobacter trogontum strain ATCC 700114 NODE_68_length_2360_cov_49.425, whole genome shotgun sequence 2,360
NZ_JRPL02000069.1 Helicobacter trogontum strain ATCC 700114 NODE_69_length_2236_cov_36.1282, whole genome shotgun sequence 2,236
NZ_JRPL02000070.1 Helicobacter trogontum strain ATCC 700114 NODE_70_length_2192_cov_92.8347, whole genome shotgun sequence 2,192
NZ_JRPL02000071.1 Helicobacter trogontum strain ATCC 700114 NODE_71_length_2152_cov_105.277, whole genome shotgun sequence 2,152
NZ_JRPL02000072.1 Helicobacter trogontum strain ATCC 700114 NODE_72_length_2037_cov_101.36, whole genome shotgun sequence 2,037
NZ_JRPL02000073.1 Helicobacter trogontum strain ATCC 700114 NODE_73_length_2037_cov_41.5108, whole genome shotgun sequence 2,037
NZ_JRPL02000074.1 Helicobacter trogontum strain ATCC 700114 NODE_74_length_2005_cov_208.14, whole genome shotgun sequence 2,005
NZ_JRPL02000075.1 Helicobacter trogontum strain ATCC 700114 NODE_75_length_1869_cov_51.3893, whole genome shotgun sequence 1,869
NZ_JRPL02000076.1 Helicobacter trogontum strain ATCC 700114 NODE_76_length_1833_cov_281.527, whole genome shotgun sequence 1,833
NZ_JRPL02000077.1 Helicobacter trogontum strain ATCC 700114 NODE_77_length_1792_cov_149.951, whole genome shotgun sequence 1,792
NZ_JRPL02000078.1 Helicobacter trogontum strain ATCC 700114 NODE_78_length_1732_cov_109.345, whole genome shotgun sequence 1,732
NZ_JRPL02000079.1 Helicobacter trogontum strain ATCC 700114 NODE_79_length_1615_cov_36.6933, whole genome shotgun sequence 1,615
NZ_JRPL02000080.1 Helicobacter trogontum strain ATCC 700114 NODE_80_length_1578_cov_94.6011, whole genome shotgun sequence 1,578
NZ_JRPL02000081.1 Helicobacter trogontum strain ATCC 700114 NODE_81_length_1571_cov_51.4008, whole genome shotgun sequence 1,571
NZ_JRPL02000082.1 Helicobacter trogontum strain ATCC 700114 NODE_82_length_1520_cov_44.4075, whole genome shotgun sequence 1,520
NZ_JRPL02000083.1 Helicobacter trogontum strain ATCC 700114 NODE_83_length_1486_cov_107.11, whole genome shotgun sequence 1,486
NZ_JRPL02000084.1 Helicobacter trogontum strain ATCC 700114 NODE_84_length_1399_cov_86.4254, whole genome shotgun sequence 1,399
NZ_JRPL02000085.1 Helicobacter trogontum strain ATCC 700114 NODE_85_length_1394_cov_146.718, whole genome shotgun sequence 1,394
NZ_JRPL02000086.1 Helicobacter trogontum strain ATCC 700114 NODE_86_length_1392_cov_91.9118, whole genome shotgun sequence 1,392
NZ_JRPL02000087.1 Helicobacter trogontum strain ATCC 700114 NODE_87_length_1315_cov_215.223, whole genome shotgun sequence 1,315
NZ_JRPL02000088.1 Helicobacter trogontum strain ATCC 700114 NODE_88_length_1229_cov_219.404, whole genome shotgun sequence 1,229
NZ_JRPL02000089.1 Helicobacter trogontum strain ATCC 700114 NODE_89_length_1145_cov_84.8107, whole genome shotgun sequence 1,145
NZ_JRPL02000090.1 Helicobacter trogontum strain ATCC 700114 NODE_93_length_1058_cov_31.8665, whole genome shotgun sequence 1,058
NZ_JRPL02000091.1 Helicobacter trogontum strain ATCC 700114 NODE_94_length_991_cov_51.9148, whole genome shotgun sequence 991
NZ_JRPL02000092.1 Helicobacter trogontum strain ATCC 700114 NODE_95_length_989_cov_83.9292, whole genome shotgun sequence 989
NZ_JRPL02000093.1 Helicobacter trogontum strain ATCC 700114 NODE_96_length_893_cov_90.3161, whole genome shotgun sequence 893
NZ_JRPL02000094.1 Helicobacter trogontum strain ATCC 700114 NODE_97_length_888_cov_37.4651, whole genome shotgun sequence 888
NZ_JRPL02000095.1 Helicobacter trogontum strain ATCC 700114 NODE_98_length_882_cov_37.7995, whole genome shotgun sequence 882
NZ_JRPL02000096.1 Helicobacter trogontum strain ATCC 700114 NODE_99_length_874_cov_109.907, whole genome shotgun sequence 874
NZ_JRPL02000097.1 Helicobacter trogontum strain ATCC 700114 NODE_100_length_839_cov_136.532, whole genome shotgun sequence 839
NZ_JRPL02000098.1 Helicobacter trogontum strain ATCC 700114 NODE_101_length_789_cov_100.326, whole genome shotgun sequence 789
NZ_JRPL02000099.1 Helicobacter trogontum strain ATCC 700114 NODE_102_length_769_cov_38.3015, whole genome shotgun sequence 769
NZ_JRPL02000100.1 Helicobacter trogontum strain ATCC 700114 NODE_104_length_703_cov_104.538, whole genome shotgun sequence 703
NZ_JRPL02000101.1 Helicobacter trogontum strain ATCC 700114 NODE_105_length_671_cov_44.3339, whole genome shotgun sequence 671
NZ_JRPL02000102.1 Helicobacter trogontum strain ATCC 700114 NODE_107_length_642_cov_106.72, whole genome shotgun sequence 642
NZ_JRPL02000103.1 Helicobacter trogontum strain ATCC 700114 NODE_109_length_621_cov_126.142, whole genome shotgun sequence 621
NZ_JRPL02000104.1 Helicobacter trogontum strain ATCC 700114 NODE_110_length_609_cov_84.3863, whole genome shotgun sequence 609
NZ_JRPL02000105.1 Helicobacter trogontum strain ATCC 700114 NODE_111_length_562_cov_42.743, whole genome shotgun sequence 562
NZ_JRPL02000106.1 Helicobacter trogontum strain ATCC 700114 NODE_112_length_560_cov_91.5727, whole genome shotgun sequence 560
NZ_JRPL02000107.1 Helicobacter trogontum strain ATCC 700114 NODE_113_length_542_cov_85.0226, whole genome shotgun sequence 542
NZ_JRPL02000108.1 Helicobacter trogontum strain ATCC 700114 NODE_114_length_533_cov_117.039, whole genome shotgun sequence 533
NZ_JRPL02000109.1 Helicobacter trogontum strain ATCC 700114 NODE_115_length_512_cov_118.109, whole genome shotgun sequence 512
NZ_JRPL02000110.1 Helicobacter trogontum strain ATCC 700114 NODE_116_length_476_cov_115.599, whole genome shotgun sequence 476
NZ_JRPL02000111.1 Helicobacter trogontum strain ATCC 700114 NODE_118_length_474_cov_220.208, whole genome shotgun sequence 474
NZ_JRPL02000112.1 Helicobacter trogontum strain ATCC 700114 NODE_119_length_473_cov_69.0909, whole genome shotgun sequence 473
NZ_JRPL02000113.1 Helicobacter trogontum strain ATCC 700114 NODE_124_length_470_cov_137.229, whole genome shotgun sequence 470
NZ_JRPL02000114.1 Helicobacter trogontum strain ATCC 700114 NODE_127_length_466_cov_46.6104, whole genome shotgun sequence 466
NZ_JRPL02000115.1 Helicobacter trogontum strain ATCC 700114 NODE_131_length_440_cov_180.431, whole genome shotgun sequence 440
NZ_JRPL02000116.1 Helicobacter trogontum strain ATCC 700114 NODE_148_length_412_cov_66.0351, whole genome shotgun sequence 412
NZ_JRPL02000117.1 Helicobacter trogontum strain ATCC 700114 NODE_150_length_409_cov_95.9742, whole genome shotgun sequence 409
NZ_JRPL02000118.1 Helicobacter trogontum strain ATCC 700114 NODE_152_length_400_cov_36.9668, whole genome shotgun sequence 400
NZ_JRPL02000119.1 Helicobacter trogontum strain ATCC 700114 NODE_187_length_340_cov_86.9004, whole genome shotgun sequence 340
NZ_JRPL02000120.1 Helicobacter trogontum strain ATCC 700114 NODE_188_length_330_cov_107.944, whole genome shotgun sequence 330
NZ_JRPL02000121.1 Helicobacter trogontum strain ATCC 700114 NODE_189_length_304_cov_44.0341, whole genome shotgun sequence 304

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory